Detailed information NTG0224119

Bioinformatically predicted

Overview

• Name: comA
• Type: Machinery gene
• Locus tag: B7D75_RS10255
• Genome accession: NZ_CP020560
• Coordinates: 2140411..2142633 (+)
• Length: 740 a.a.
• NCBI ID: WP_107113970.1
• Uniprot ID: -
• Organism: Pseudomonas paraeruginosa strain Cr1
• Function: ssDNA transport through the inner membrane (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2135411..2147633

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
B7D75_RS10230 (B7D75_10230)	-	2135704..2136303 (-)	600	WP_043102414.1	PilZ domain-containing protein	-
B7D75_RS10235 (B7D75_10235)	-	2136406..2137656 (+)	1251	WP_003156868.1	lipoprotein-releasing ABC transporter permease subunit	-
B7D75_RS10240 (B7D75_10240)	lolD	2137649..2138332 (+)	684	WP_107113967.1	lipoprotein-releasing ABC transporter ATP-binding protein LolD	-
B7D75_RS10245 (B7D75_10245)	-	2138402..2139646 (+)	1245	WP_107113968.1	lipoprotein-releasing ABC transporter permease subunit	-
B7D75_RS10250 (B7D75_10250)	-	2139747..2140280 (-)	534	WP_107113969.1	DUF2062 domain-containing protein	-
B7D75_RS10255 (B7D75_10255)	comA	2140411..2142633 (+)	2223	WP_107113970.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
B7D75_RS10260 (B7D75_10260)	exbB	2142706..2143341 (+)	636	WP_003091163.1	MotA/TolQ/ExbB proton channel family protein	Machinery gene
B7D75_RS10265 (B7D75_10265)	-	2143338..2143778 (+)	441	WP_012075163.1	biopolymer transporter ExbD	-
B7D75_RS10270 (B7D75_10270)	lpxK	2143778..2144776 (+)	999	WP_053813705.1	tetraacyldisaccharide 4'-kinase	-
B7D75_RS10275 (B7D75_10275)	-	2144814..2144999 (+)	186	WP_003157522.1	Trm112 family protein	-
B7D75_RS10280 (B7D75_10280)	kdsB	2144999..2145763 (+)	765	WP_012075164.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
B7D75_RS10285 (B7D75_10285)	-	2145763..2146227 (+)	465	WP_012075165.1	low molecular weight protein-tyrosine-phosphatase	-
B7D75_RS10290 (B7D75_10290)	murB	2146224..2147243 (+)	1020	WP_058130157.1	UDP-N-acetylmuramate dehydrogenase	-

Sequence

Protein

• Length: 740 a.a.
• Molecular weight: 79733.20 Da
• Isoelectric Point: 11.0254

>NTDB_id=224119 B7D75_RS10255 WP_107113970.1 2140411..2142633(+) (comA) [Pseudomonas paraeruginosa strain Cr1]
MRLGLPALAAGLLALRLLPELPSAGWLLAAAAAGLLLLFGRLYWLGLFLLGFAWACVSAQAALDGRLAAELDGRTLWLEG
RISGLPASGNGVTRFQLEDVSSPREALPARLRLSWRGAPPLMGGERWRLAVNLKRPRGLVNTAGFDYEAWLLAQRIGAIG
TVKAGERLRPASGLDAWRDAWRQRLLAADTQGRGGALAALVLGDGSGLRADEWRMLQDTGTVHLMVISGSHISLLAGMLY
GLVAGLFRLGCWPRRLPWLPCACGLALAGAWGYGLMAGFEVPVRRACLMVSLALLWRLRFRHLGVSRPLLGTLVLVLLAE
PLACLQAGFWLSFLAVALLLWLFAGRLGRWRWWTAWGRAQWGMALGLAMPSLALGLPLSLSGALANLLAVPWVEMLVVPP
ALAGSLLLGVPGVGKSLLWIAGASLDQLFRLLVLLAGLAGAWQPPTATAWGVALGMLGALCWLAPAGLPVRGLGALLMLP
ALAPSLRPIEAGYAEVRMLDVGQGLAVLLRTRGHALLYDAGARQGDFDMGERVVLPVLRSLDLRRLDGLLLSHADNDHAG
GAPAVVSRFAPGWVVSGEPARLPSSLAARGCEERRWEWDGVTFAQWSWARADSANDRSCVLRVEARGEVLLLTGDIARAA
EYAWLARQGEPRVDWLQAPHHGSRSSSGEAFVRRTRPRHVLVSRGWRNAFGHPHAEVVQRYAGIAAQIHDTARDGALTFT
LGRGGEARGEREAAHFWREK

Nucleotide

• Length: 2223 bp

>NTDB_id=224119 B7D75_RS10255 WP_107113970.1 2140411..2142633(+) (comA) [Pseudomonas paraeruginosa strain Cr1]
ATGCGCCTGGGATTGCCAGCTCTCGCCGCGGGGCTGCTGGCCCTGCGCCTGCTGCCGGAGTTGCCGTCGGCTGGCTGGTT
GCTGGCGGCGGCCGCCGCCGGTCTGCTGCTGCTCTTCGGCCGTCTCTACTGGCTGGGTCTGTTCCTGCTCGGCTTCGCCT
GGGCCTGCGTGTCGGCACAGGCCGCGCTGGACGGGCGCCTCGCCGCCGAGCTGGATGGCCGGACGCTATGGCTGGAAGGG
CGTATCAGCGGCCTGCCGGCAAGCGGGAATGGCGTCACGCGCTTCCAGTTGGAGGACGTGAGCAGCCCGCGCGAAGCGCT
GCCTGCCCGCCTACGCCTGAGCTGGCGCGGCGCGCCGCCGCTCATGGGGGGTGAGCGCTGGCGCCTGGCGGTGAACCTGA
AGCGGCCACGCGGCCTGGTGAATACGGCGGGCTTCGATTACGAAGCCTGGCTACTGGCGCAGCGGATCGGCGCCATCGGC
ACGGTGAAGGCGGGCGAGCGGTTGCGTCCGGCCAGCGGCCTGGATGCCTGGCGCGACGCCTGGCGCCAGCGTCTGCTCGC
GGCGGATACCCAGGGTCGCGGCGGCGCGCTGGCGGCGCTGGTGCTGGGAGACGGCTCAGGCTTGCGCGCGGATGAATGGC
GCATGCTCCAGGACACCGGCACCGTGCACCTGATGGTGATTTCCGGATCGCATATCTCGCTGTTGGCGGGAATGCTCTAT
GGCCTGGTGGCGGGCCTGTTCCGCCTGGGTTGCTGGCCTCGCCGCCTGCCCTGGCTGCCCTGCGCCTGCGGCCTGGCGCT
GGCTGGTGCCTGGGGCTACGGGCTGATGGCGGGATTCGAGGTGCCGGTGCGGCGCGCCTGCCTGATGGTCAGCCTGGCGC
TGCTCTGGCGCCTGCGCTTCCGTCACCTGGGCGTGTCGAGGCCGCTGCTCGGGACGCTGGTGCTGGTGCTCCTGGCGGAG
CCGCTGGCCTGCCTGCAGGCGGGATTCTGGCTGTCGTTCCTGGCGGTGGCGCTGCTGCTCTGGCTGTTCGCTGGGCGCCT
CGGGCGCTGGCGCTGGTGGACGGCCTGGGGGCGGGCGCAATGGGGCATGGCGCTGGGGCTGGCGATGCCGTCGCTGGCGC
TGGGCTTGCCGTTGAGCCTGAGCGGGGCGCTGGCGAACCTGCTGGCGGTGCCCTGGGTAGAAATGCTGGTAGTGCCGCCG
GCCCTGGCCGGGAGCCTGTTGCTCGGTGTGCCTGGCGTGGGCAAGAGCCTGTTGTGGATCGCTGGCGCCTCGCTGGACCA
ACTGTTCCGCCTGCTCGTCCTGCTGGCGGGGCTGGCCGGGGCCTGGCAGCCGCCTACCGCCACGGCCTGGGGCGTCGCCC
TGGGAATGCTCGGCGCGCTCTGCTGGCTGGCGCCAGCCGGGTTGCCGGTGCGAGGCCTGGGGGCGTTGCTGATGCTACCG
GCGCTGGCGCCGTCGCTGCGACCGATCGAGGCGGGGTATGCCGAGGTGCGGATGCTGGATGTCGGCCAGGGGCTGGCGGT
GCTGCTGCGTACCCGCGGGCACGCGCTGCTGTATGACGCCGGTGCGCGACAGGGCGACTTCGACATGGGCGAGCGGGTGG
TCCTGCCGGTGCTGCGCAGCCTCGACCTGCGGCGCCTGGACGGCCTGTTGCTGAGCCACGCCGACAACGACCATGCCGGT
GGCGCGCCTGCGGTGGTTTCCCGTTTCGCCCCGGGCTGGGTGGTCAGTGGCGAGCCGGCGCGCCTGCCGTCGTCGCTGGC
GGCGCGGGGATGCGAGGAGCGGCGCTGGGAGTGGGACGGCGTGACCTTCGCCCAGTGGTCATGGGCCCGGGCCGACAGCG
CTAACGACCGTTCCTGCGTGTTGCGGGTGGAAGCGCGCGGCGAGGTGCTGCTGCTGACCGGCGACATCGCGCGCGCTGCC
GAGTACGCCTGGCTGGCGCGCCAGGGCGAGCCGCGGGTCGACTGGTTGCAGGCGCCACATCATGGCAGTCGCAGTTCCTC
CGGAGAGGCCTTCGTGCGACGGACCCGGCCGCGCCATGTGCTGGTCTCGCGGGGTTGGCGCAATGCCTTCGGCCATCCTC
ATGCGGAGGTGGTGCAGCGCTACGCCGGCATCGCCGCGCAGATCCACGACACCGCTCGCGACGGAGCGCTGACCTTTACC
CTGGGGCGCGGTGGGGAGGCACGCGGGGAGCGTGAAGCGGCGCACTTCTGGCGGGAAAAATGA

Domains

Predicted by InterproScan.

• Metallo-beta-lactamase superfamily (Lactamase_B) (500-677)

• Competence protein (Competence) (200-463)

• Domain of unknown function (DUF4131) (DUF4131) (20-167)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comA	Pseudomonas stutzeri DSM 10701	59.167	97.297	0.576
comA	Ralstonia pseudosolanacearum GMI1000	35.111	100	0.365