Detailed information NTG0223626

Bioinformatically predicted

Overview

• Name: ctsF
• Type: Machinery gene
• Locus tag: CHELV3228_RS08590
• Genome accession: NZ_CP020478
• Coordinates: 1621786..1622973 (-)
• Length: 395 a.a.
• NCBI ID: WP_082200590.1
• Uniprot ID: A0AAX2UL51
• Organism: Campylobacter helveticus strain ATCC 51209
• Function: type II secretion system/type IV pilin; DNA uptake (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1616786..1627973

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
CHELV3228_RS08570 (CHELV3228_1685)	-	1617180..1617995 (+)	816	WP_082200586.1	thiamine-phosphate kinase	-
CHELV3228_RS08575 (CHELV3228_1686)	truD	1617964..1619094 (+)	1131	WP_082200587.1	tRNA pseudouridine(13) synthase TruD	-
CHELV3228_RS08580 (CHELV3228_1687)	-	1619138..1619770 (+)	633	WP_082200588.1	hypothetical protein	-
CHELV3228_RS08585 (CHELV3228_1688)	-	1619928..1621760 (+)	1833	WP_082200589.1	flagellin	-
CHELV3228_RS08590 (CHELV3228_1689)	ctsF	1621786..1622973 (-)	1188	WP_082200590.1	type II secretion system F family protein	Machinery gene
CHELV3228_RS08595 (CHELV3228_1690)	ctsE	1622970..1624583 (-)	1614	WP_234981007.1	GspE/PulE family protein	Machinery gene
CHELV3228_RS08600 (CHELV3228_1691)	-	1624583..1625149 (-)	567	WP_082200592.1	transformation system protein	-
CHELV3228_RS08605 (CHELV3228_1692)	-	1625152..1625757 (-)	606	WP_082200593.1	ATP-binding protein	-
CHELV3228_RS08610 (CHELV3228_1693)	ctsD	1625750..1627159 (-)	1410	WP_082200594.1	pilus (MSHA type) biogenesis protein MshL	Machinery gene
CHELV3228_RS08615 (CHELV3228_1694)	-	1627137..1627436 (-)	300	WP_082200595.1	transformation system protein	-

Sequence

Protein

• Length: 395 a.a.
• Molecular weight: 45027.54 Da
• Isoelectric Point: 9.7175

>NTDB_id=223626 CHELV3228_RS08590 WP_082200590.1 1621786..1622973(-) (ctsF) [Campylobacter helveticus strain ATCC 51209]
MKTYELYYLKNQQKLRKILKAKNLNTAQAMALKQNLQILSLKELKKQSKVKINDMLFCAFFKEFALLLNAGLSVKEALNL
MGESSVKSLRGVLGELSANLNSGQNLSQAFSNLSLNLNLSELSLIKMGEKTGNLALIFSQIAELREKLILNKKRFKKAIH
YPCMVFVALFGAFLFLMFFVVPEFLELFESLGANLPFITQVLLSFYMFLSAYYLPLIFGFVGFLSVFVLAYKKSEKFAFL
VDFMLLKLPFFSRFILYNQNYYFFMIFSLLLQSGNALSHAFELASSSVENQFLKEKFRQIHLSLEQGLELSLAFKKAGIF
DELVISLLHSAMKSASLDNLSAKIAHFYEEKQEDLLDKFLHFLEPLMTLLVGILVLFLALGIFLPMWELSSGANV

Nucleotide

• Length: 1188 bp

>NTDB_id=223626 CHELV3228_RS08590 WP_082200590.1 1621786..1622973(-) (ctsF) [Campylobacter helveticus strain ATCC 51209]
GTGAAAACTTATGAGCTTTATTATCTTAAAAATCAACAAAAATTAAGAAAAATTCTAAAAGCGAAAAATCTTAACACCGC
CCAGGCAATGGCTTTAAAGCAGAATTTACAAATTTTAAGCCTTAAAGAATTAAAAAAACAAAGCAAGGTCAAGATAAACG
ATATGCTTTTTTGTGCGTTTTTTAAGGAATTTGCCCTTTTGCTTAATGCAGGTTTGAGCGTGAAAGAAGCTTTAAATTTG
ATGGGTGAAAGTTCAGTAAAGAGCCTAAGGGGTGTGCTGGGGGAATTAAGTGCGAATTTAAATTCTGGGCAGAATTTAAG
TCAAGCATTTAGCAATTTATCTTTAAATTTAAATTTGAGTGAGTTGAGTTTGATTAAAATGGGTGAAAAAACGGGAAATT
TAGCTCTCATTTTTTCTCAAATCGCAGAGCTTAGAGAAAAGCTTATTTTAAATAAAAAGCGTTTTAAAAAGGCGATTCAT
TATCCTTGTATGGTTTTTGTGGCACTTTTTGGGGCGTTTTTATTTTTGATGTTTTTTGTTGTGCCTGAATTTTTAGAACT
TTTTGAAAGTTTGGGAGCAAATTTGCCTTTTATCACTCAGGTATTACTGAGTTTTTATATGTTTTTAAGTGCGTATTATT
TGCCCTTGATTTTTGGTTTTGTGGGGTTTTTAAGCGTTTTCGTTTTGGCGTATAAAAAGAGTGAAAAATTTGCTTTTTTG
GTGGATTTTATGCTTTTAAAGCTTCCATTTTTTTCGCGTTTTATACTTTATAATCAAAATTATTATTTTTTTATGATTTT
TTCTTTACTTTTGCAAAGTGGTAATGCACTTTCTCACGCTTTTGAGTTGGCAAGTTCTAGCGTAGAAAATCAATTTTTAA
AAGAGAAATTTAGACAAATTCATCTTTCTTTAGAGCAGGGCTTAGAGCTTTCTTTGGCTTTTAAAAAGGCAGGGATTTTT
GATGAGCTTGTCATTTCTTTGCTTCATAGTGCGATGAAAAGTGCTTCGTTGGATAATTTAAGTGCCAAGATAGCACATTT
TTATGAAGAAAAACAAGAAGATTTGTTAGATAAATTCTTGCATTTTTTAGAGCCTTTGATGACTTTGTTGGTGGGAATTT
TGGTTTTATTTTTAGCTTTGGGGATATTTTTACCGATGTGGGAGTTAAGCAGCGGGGCAAATGTTTAA

Domains

Predicted by InterproScan.

• Type II secretion system (T2SS), protein F (T2SSF) (60-182)

• Type II secretion system (T2SS), protein F (T2SSF) (266-385)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ctsF	Campylobacter jejuni subsp. jejuni 81-176	53.671	100	0.537