Detailed information NTG0022334

Bioinformatically predicted

Overview

• Name: ruvA
• Type: Machinery gene
• Locus tag: NMB_RS01390
• Genome accession: NC_003112
• Coordinates: 269389..269973 (-)
• Length: 194 a.a.
• NCBI ID: WP_002223336.1
• Uniprot ID: Q9K1A2
• Organism: Neisseria meningitidis MC58
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 264389..274973

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
NMB_RS01365 (NMB0260)	-	264683..264982 (+)	300	WP_002221916.1	DUF2818 family protein	-
NMB_RS01370 (NMB0261)	-	265091..265987 (-)	897	WP_002221917.1	polyprenyl synthetase family protein	-
NMB_RS01375 (NMB0262)	-	265971..266195 (-)	225	WP_002221918.1	exodeoxyribonuclease VII small subunit	-
NMB_RS01380 (NMB0263)	rsgA	266442..267365 (-)	924	WP_002221919.1	ribosome small subunit-dependent GTPase A	-
NMB_RS01385 (NMB0264)	-	267370..269226 (-)	1857	WP_010980767.1	ABC transporter ATP-binding protein	-
NMB_RS11310	-	269252..269389 (-)	138	WP_002240237.1	hypothetical protein	-
NMB_RS01390 (NMB0265)	ruvA	269389..269973 (-)	585	WP_002223336.1	Holliday junction branch migration protein RuvA	Machinery gene
NMB_RS01395 (NMB0266)	-	270055..270381 (-)	327	WP_002221923.1	PepSY domain-containing protein	-
NMB_RS01400 (NMB0267)	-	270443..271162 (-)	720	WP_002221924.1	septal ring lytic transglycosylase RlpA family protein	-
NMB_RS01405	-	271159..271281 (-)	123	WP_009346050.1	hypothetical protein	-
NMB_RS01410 (NMB0268)	trmL	271292..271756 (-)	465	WP_002218664.1	tRNA (uridine(34)/cytosine(34)/5- carboxymethylaminomethyluridine(34)-2'-O)- methyltransferase TrmL	-
NMB_RS01415 (NMB0269)	-	271821..272546 (-)	726	WP_002224838.1	ComF family protein	-
NMB_RS01420 (NMB0270)	bioH	272545..273294 (+)	750	WP_002224839.1	pimeloyl-ACP methyl ester esterase BioH	-
NMB_RS01425 (NMB0271)	-	273291..274079 (+)	789	WP_002224840.1	hypothetical protein	-
NMB_RS11900	-	274406..274537 (+)	132	WP_009346051.1	hypothetical protein	-

Sequence

Protein

• Length: 194 a.a.
• Molecular weight: 20687.90 Da
• Isoelectric Point: 5.3813

>NTDB_id=22334 NMB_RS01390 WP_002223336.1 269389..269973(-) (ruvA) [Neisseria meningitidis MC58]
MISRLTGKLVEKNPPQIVIDVNGVGYEADVSMQTFYNLPPVGESVQLFTQLIIREDAHLLFGFATAEERKTFRQLIKVGG
IGAKTALGILSAMTADELARAVAEEDVKRLSSAPGIGKKTAERMVLELRGKLVAHTVTDGLFAAAPAADETEDIVSTLLA
LGYSEREAKAAVKGVPEGTDVGEGVRLALKNLLK

Nucleotide

• Length: 585 bp

>NTDB_id=22334 NMB_RS01390 WP_002223336.1 269389..269973(-) (ruvA) [Neisseria meningitidis MC58]
ATGATCAGCAGACTGACCGGCAAACTGGTTGAAAAAAACCCTCCGCAAATCGTCATCGATGTCAACGGTGTCGGCTATGA
GGCCGACGTATCGATGCAGACCTTCTACAACCTGCCGCCCGTGGGTGAAAGCGTACAACTGTTTACCCAGCTTATCATTC
GGGAAGACGCACATCTTTTATTTGGTTTTGCCACTGCGGAAGAACGCAAGACCTTCCGCCAACTGATCAAGGTCGGCGGC
ATCGGCGCGAAAACGGCTTTGGGCATTTTGTCGGCAATGACTGCCGACGAACTGGCGCGGGCGGTTGCAGAAGAAGATGT
CAAACGCCTCTCCTCCGCCCCGGGAATCGGCAAAAAAACCGCCGAACGTATGGTTTTGGAACTGCGCGGCAAGCTGGTCG
CGCATACGGTAACGGACGGGCTGTTTGCCGCCGCACCCGCCGCCGACGAAACGGAAGACATCGTCAGCACGCTGCTTGCG
CTGGGTTACAGCGAACGCGAAGCAAAAGCGGCGGTCAAAGGCGTTCCGGAGGGGACGGACGTGGGCGAAGGCGTGCGCCT
TGCTTTGAAAAACCTGCTGAAATAA

Domains

Predicted by InterProScan.

• RuvA N terminal domain (RuvA_N) (1-62)

• Helix-hairpin-helix domain (HHH_5) (72-129)

• RuvA, C-terminal domain (RuvA_C) (150-192)

3D structure

• AlphaFold DB: Q9K1A2

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ruvA	Streptococcus pneumoniae R6	37.5	100	0.387
ruvA	Streptococcus pneumoniae D39	37.5	100	0.387
ruvA	Streptococcus pneumoniae TIGR4	37	100	0.381
ruvA	Bacillus subtilis subsp. subtilis str. 168	35.437	100	0.376