Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrR   Type   Regulator
Locus tag   A6J87_RS02695 Genome accession   NZ_CP020451
Coordinates   553123..553566 (-) Length   147 a.a.
NCBI ID   WP_105257710.1    Uniprot ID   -
Organism   Streptococcus salivarius strain FDAARGOS_259     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 548123..558566
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  A6J87_RS02680 (A6J87_02665) - 548806..549429 (-) 624 WP_037601875.1 GNAT family N-acetyltransferase -
  A6J87_RS02685 (A6J87_02670) rcrQ 549537..551315 (-) 1779 WP_080611533.1 ABC transporter ATP-binding protein Regulator
  A6J87_RS02690 (A6J87_02675) rcrP 551305..553119 (-) 1815 WP_080611534.1 ABC transporter ATP-binding protein Regulator
  A6J87_RS02695 (A6J87_02680) rcrR 553123..553566 (-) 444 WP_105257710.1 MarR family winged helix-turn-helix transcriptional regulator Regulator
  A6J87_RS02700 (A6J87_02685) - 553755..554165 (-) 411 WP_080611536.1 peptide deformylase -
  A6J87_RS02705 (A6J87_02690) - 554322..555863 (-) 1542 WP_080611537.1 hypothetical protein -
  A6J87_RS02710 (A6J87_02695) gdhA 556151..557503 (-) 1353 WP_070576571.1 NADP-specific glutamate dehydrogenase -

Sequence

Protein


Download         Length: 147 a.a.        Molecular weight: 17107.59 Da        Isoelectric Point: 9.5655

>NTDB_id=223230 A6J87_RS02695 WP_105257710.1 553123..553566(-) (rcrR) [Streptococcus salivarius strain FDAARGOS_259]
MHGKDPFNEIKKFINTMESRVQELGKAYGVEHLAGPQGFAVRYLFENQDKEIFIKDIEKRLSISKSVASNLVKRMEKNGF
VELVTSDKDKRYKYVHLTDLGKKKAQDVGHFQEAIHEQLLEGISKEDAEIAFRVFHQIRKNLEKNKE

Nucleotide


Download         Length: 444 bp        

>NTDB_id=223230 A6J87_RS02695 WP_105257710.1 553123..553566(-) (rcrR) [Streptococcus salivarius strain FDAARGOS_259]
ATGCATGGAAAAGATCCTTTTAATGAAATCAAAAAATTCATCAATACCATGGAATCTAGAGTGCAAGAGCTAGGCAAAGC
TTACGGCGTCGAGCATTTAGCTGGTCCACAAGGGTTTGCCGTCAGGTACTTGTTTGAGAACCAAGATAAAGAAATCTTTA
TCAAAGATATCGAGAAAAGGCTATCTATATCTAAATCAGTGGCTAGTAATTTGGTCAAACGTATGGAGAAAAACGGTTTC
GTTGAATTGGTGACATCGGACAAGGACAAACGCTACAAGTATGTTCATCTGACTGACTTGGGTAAAAAGAAGGCTCAAGA
TGTTGGACATTTCCAAGAGGCTATCCATGAACAGCTATTAGAAGGCATTTCTAAAGAGGATGCTGAAATAGCTTTTCGGG
TCTTTCACCAAATTCGTAAGAATTTAGAAAAAAATAAGGAGTAA

Domains

Predicted by InterproScan.

MarR family (MarR_2)

(42-91)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrR Streptococcus mutans UA159

56.738

95.918

0.544

Multiple sequence alignment