Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrP   Type   Regulator
Locus tag   A6J87_RS02690 Genome accession   NZ_CP020451
Coordinates   551305..553119 (-) Length   604 a.a.
NCBI ID   WP_080611534.1    Uniprot ID   -
Organism   Streptococcus salivarius strain FDAARGOS_259     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 546305..558119
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  A6J87_RS02670 (A6J87_02655) - 547355..548032 (-) 678 WP_060972076.1 response regulator transcription factor -
  A6J87_RS02675 (A6J87_02660) - 548034..548657 (-) 624 WP_070576554.1 GTP pyrophosphokinase family protein -
  A6J87_RS02680 (A6J87_02665) - 548806..549429 (-) 624 WP_037601875.1 GNAT family N-acetyltransferase -
  A6J87_RS02685 (A6J87_02670) rcrQ 549537..551315 (-) 1779 WP_080611533.1 ABC transporter ATP-binding protein Regulator
  A6J87_RS02690 (A6J87_02675) rcrP 551305..553119 (-) 1815 WP_080611534.1 ABC transporter ATP-binding protein Regulator
  A6J87_RS02695 (A6J87_02680) rcrR 553123..553566 (-) 444 WP_105257710.1 MarR family winged helix-turn-helix transcriptional regulator Regulator
  A6J87_RS02700 (A6J87_02685) - 553755..554165 (-) 411 WP_080611536.1 peptide deformylase -
  A6J87_RS02705 (A6J87_02690) - 554322..555863 (-) 1542 WP_080611537.1 hypothetical protein -
  A6J87_RS02710 (A6J87_02695) gdhA 556151..557503 (-) 1353 WP_070576571.1 NADP-specific glutamate dehydrogenase -

Sequence

Protein


Download         Length: 604 a.a.        Molecular weight: 66986.56 Da        Isoelectric Point: 6.1400

>NTDB_id=223229 A6J87_RS02690 WP_080611534.1 551305..553119(-) (rcrP) [Streptococcus salivarius strain FDAARGOS_259]
MFKIFKRLTAKELSMIILAVIFVCLNVYLNLKIPDYMSDITTLLSTKGTKASDIFAWNTDAPGMRMLLMSFAGFMASVVV
GFLAARTAASFTTRLRDDIFHQVLNFSDAEIKQFSIPSLLTRTTNDITQLQMVLTMGLQVITQGPIMAIWAITKIADKNG
NWLLALLVAVAVIAVLMLFLLIMVMPKQRLIQTLTDKLNSVTRESLTGIRVVRAYNAESYQEDKFEKANTDLTQNNLFIG
RSFALLTPVMTAVSSGLTLAIYWIGAHLIEDVKIPTDPTKIAGAMEDKVHLFSDMVVYSSYAMQVVMGFMMMIVVFFLLP
RAVVAAGRINEVLDTQSSVSYPENSSEKPKDVGTVEFDDVSFRYSETSEPVLEHVSFKAKKGDTVAFIGSTGSGKSTLVN
LIPRFYDATQGTIKVDGVDVRHYDHETLHNIVGYIPQKAVLFSGNITSNMTMGTSNNSPLDDAKIWEALELAQGKDFVEN
KEGQLKAEVAQAGSNFSGGQKQRLAIARALARKPEILIFDDSFSALDYKTDRKLRQELSEKTQDMTKLIVAQRISTIMDA
DQILVLDQGKVVGQGTHKELLANNEVYQEIAYSQLSKEELENGK

Nucleotide


Download         Length: 1815 bp        

>NTDB_id=223229 A6J87_RS02690 WP_080611534.1 551305..553119(-) (rcrP) [Streptococcus salivarius strain FDAARGOS_259]
ATGTTTAAAATTTTTAAACGTTTGACAGCAAAAGAGTTAAGCATGATTATCTTAGCTGTGATATTTGTTTGTTTGAACGT
CTATCTAAACTTGAAAATTCCAGACTATATGTCTGACATTACGACCCTCTTATCAACCAAGGGGACTAAAGCGTCGGATA
TTTTTGCCTGGAATACAGATGCCCCAGGGATGCGAATGCTTTTAATGTCTTTTGCAGGCTTTATGGCCTCAGTAGTGGTT
GGTTTCCTAGCTGCCAGAACAGCAGCAAGTTTTACAACCCGTCTTCGTGATGATATCTTCCATCAAGTTCTAAATTTTTC
GGATGCAGAGATTAAGCAATTCTCCATTCCTAGTCTTTTGACCCGCACGACAAATGATATTACCCAATTACAGATGGTAC
TGACCATGGGACTACAGGTCATTACACAGGGGCCTATCATGGCCATTTGGGCGATTACAAAGATTGCCGATAAAAATGGA
AATTGGCTCCTTGCCTTGCTTGTCGCTGTGGCAGTGATTGCCGTTCTCATGCTCTTCCTCTTAATTATGGTTATGCCTAA
GCAACGCTTGATTCAAACTCTGACCGATAAACTGAATAGCGTAACGCGTGAATCTCTTACAGGAATTCGTGTGGTGCGTG
CCTACAATGCCGAAAGTTATCAAGAGGATAAATTTGAAAAGGCCAATACTGATTTGACCCAAAACAACCTCTTTATCGGT
CGTTCTTTTGCCTTGCTAACACCGGTAATGACTGCTGTATCCAGCGGTTTGACACTGGCTATTTATTGGATTGGTGCGCA
TCTGATTGAAGATGTTAAGATTCCAACAGATCCAACGAAAATTGCTGGTGCCATGGAAGACAAGGTCCATCTCTTCTCAG
ATATGGTTGTCTATTCGTCTTATGCCATGCAGGTTGTAATGGGATTCATGATGATGATTGTCGTTTTCTTCCTTCTTCCT
CGTGCCGTTGTAGCAGCTGGCCGTATCAATGAAGTTCTAGATACACAATCTTCAGTCTCTTACCCTGAAAATAGTTCTGA
AAAACCTAAAGACGTGGGCACTGTCGAATTCGATGATGTTTCCTTCCGTTATTCTGAAACTTCAGAGCCTGTTTTGGAGC
ATGTTAGCTTCAAAGCTAAAAAGGGTGACACGGTTGCCTTTATTGGTTCGACTGGATCTGGTAAATCAACGCTTGTCAAC
CTTATCCCACGATTTTATGATGCCACGCAAGGAACTATCAAGGTTGACGGTGTGGATGTACGACATTATGACCACGAAAC
CTTGCACAATATAGTCGGTTATATTCCACAAAAGGCTGTGCTTTTCTCAGGTAATATCACGTCAAATATGACAATGGGAA
CGAGCAATAATAGTCCTCTAGATGACGCTAAGATTTGGGAAGCTCTCGAATTGGCTCAAGGAAAAGACTTTGTTGAAAAT
AAAGAAGGCCAACTTAAGGCAGAAGTGGCTCAAGCGGGGTCTAACTTCTCAGGTGGCCAGAAGCAACGTTTGGCTATTGC
GCGTGCACTTGCCCGTAAGCCTGAAATCTTGATTTTTGACGATTCCTTCTCAGCTTTGGACTATAAGACCGATCGTAAAC
TGCGTCAAGAATTGTCTGAAAAAACACAAGATATGACCAAGTTGATTGTTGCTCAACGTATCTCTACTATTATGGATGCG
GACCAAATCTTGGTACTTGATCAAGGTAAAGTAGTCGGGCAAGGAACCCACAAGGAACTCTTGGCTAACAATGAGGTTTA
CCAAGAAATTGCTTATTCACAATTGTCTAAGGAGGAGTTAGAAAATGGAAAATAA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(372-522)

ABC transporter transmembrane region (ABC_membrane)

(16-271)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrP Streptococcus mutans UA159

67.934

100

0.68

Multiple sequence alignment