Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrQ   Type   Regulator
Locus tag   A6J87_RS02685 Genome accession   NZ_CP020451
Coordinates   549537..551315 (-) Length   592 a.a.
NCBI ID   WP_080611533.1    Uniprot ID   -
Organism   Streptococcus salivarius strain FDAARGOS_259     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 544537..556315
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  A6J87_RS02655 (A6J87_02640) frr 544572..545129 (-) 558 WP_002885567.1 ribosome recycling factor -
  A6J87_RS02660 (A6J87_02645) pyrH 545144..545881 (-) 738 WP_002885551.1 UMP kinase -
  A6J87_RS02665 (A6J87_02650) - 546118..547341 (-) 1224 WP_070576553.1 HAMP domain-containing sensor histidine kinase -
  A6J87_RS02670 (A6J87_02655) - 547355..548032 (-) 678 WP_060972076.1 response regulator transcription factor -
  A6J87_RS02675 (A6J87_02660) - 548034..548657 (-) 624 WP_070576554.1 GTP pyrophosphokinase family protein -
  A6J87_RS02680 (A6J87_02665) - 548806..549429 (-) 624 WP_037601875.1 GNAT family N-acetyltransferase -
  A6J87_RS02685 (A6J87_02670) rcrQ 549537..551315 (-) 1779 WP_080611533.1 ABC transporter ATP-binding protein Regulator
  A6J87_RS02690 (A6J87_02675) rcrP 551305..553119 (-) 1815 WP_080611534.1 ABC transporter ATP-binding protein Regulator
  A6J87_RS02695 (A6J87_02680) rcrR 553123..553566 (-) 444 WP_105257710.1 MarR family winged helix-turn-helix transcriptional regulator Regulator
  A6J87_RS02700 (A6J87_02685) - 553755..554165 (-) 411 WP_080611536.1 peptide deformylase -
  A6J87_RS02705 (A6J87_02690) - 554322..555863 (-) 1542 WP_080611537.1 hypothetical protein -

Sequence

Protein


Download         Length: 592 a.a.        Molecular weight: 64992.92 Da        Isoelectric Point: 5.0201

>NTDB_id=223228 A6J87_RS02685 WP_080611533.1 549537..551315(-) (rcrQ) [Streptococcus salivarius strain FDAARGOS_259]
MENKPKTSSYKRLKPYIKGFPIPFVLAIVGAIISAVITVIGPDKLKEITNTITEGITPTKMGTIPGIDLDKVTSIAMTLA
VLYAISAIVGYLQSFTVATVTQRFSQRFRTAIQKKINSVPLNYFDSHSQGDTLSRVTNDVDLLGQSLSQGLGTLITSSVL
LVAAIIMMFYSNVTMAFTAIGSVLIGFVLVAFIMGFSQPLFKRQQENLANINGYIEEIYTGQAVVTSYNASEESSQAFKG
LNDKLYKSMWQSQFISGIMMPLMIFIGNFGYVMVCLVGAIKVIDGSLTIGDVVAFMTYVRIFSQPLSQIAQGITQLQSAT
AAIGRIFEFLEEKDMDDESGKTAELTDTKGQVVFDHVSFGYTPEKTIIHDFSALAKPGQKIAIVGPTGAGKTTIVNLLMK
FYNINQGHITIDGVDTGDMKRETVHDQFSMVLQDTWLFEGTIRDNLIYNQENISDEQVIAAAKAVGVHHFITTLPKGYDT
YLDDSVTLSVGQKQLLTIARALLKDAPLLILDEATSSVDTRTEELIQKAMDKLMEGRTSFVIAHRLSTIRNADLILVMKD
GNIIEQGNHDELMAADGFYADLYNSQFTEEVA

Nucleotide


Download         Length: 1779 bp        

>NTDB_id=223228 A6J87_RS02685 WP_080611533.1 549537..551315(-) (rcrQ) [Streptococcus salivarius strain FDAARGOS_259]
ATGGAAAATAAGCCAAAAACATCGTCCTATAAACGCTTAAAACCCTATATTAAAGGTTTCCCAATTCCTTTTGTCCTTGC
GATTGTTGGAGCAATTATTTCAGCAGTCATTACAGTTATTGGACCAGATAAGCTTAAAGAAATTACCAATACTATTACTG
AAGGTATTACACCTACCAAAATGGGGACGATTCCAGGTATTGATTTGGATAAGGTGACAAGTATTGCTATGACCTTGGCT
GTTCTCTATGCCATTTCAGCGATTGTGGGTTACTTACAAAGCTTTACGGTTGCGACGGTTACACAACGCTTTTCACAACG
TTTCCGTACAGCTATCCAAAAGAAAATCAACAGTGTTCCCCTTAATTATTTTGACAGTCATTCTCAAGGGGACACCCTCT
CTCGTGTGACTAATGACGTTGACCTTTTGGGACAATCTCTTAGTCAAGGTCTGGGTACCCTAATTACTTCAAGTGTTCTC
TTGGTCGCAGCCATTATTATGATGTTTTACTCAAATGTCACTATGGCTTTCACTGCGATTGGTTCTGTCTTGATAGGATT
TGTTCTAGTAGCCTTCATCATGGGTTTCTCACAACCTCTTTTCAAACGTCAACAAGAAAATTTGGCTAACATTAATGGAT
ATATTGAAGAAATCTACACAGGTCAAGCAGTTGTAACGAGTTACAATGCATCTGAAGAAAGTAGTCAAGCTTTCAAGGGG
CTTAATGATAAGCTCTATAAATCGATGTGGCAATCTCAGTTTATCTCAGGTATTATGATGCCACTTATGATTTTCATTGG
GAACTTTGGTTACGTCATGGTCTGTCTTGTGGGAGCTATTAAGGTTATTGATGGTAGCTTGACTATTGGTGATGTGGTAG
CCTTCATGACTTATGTTCGTATTTTCTCACAACCTCTTTCTCAAATTGCACAAGGGATTACACAGCTCCAGTCAGCCACT
GCAGCTATTGGTCGTATCTTTGAATTTTTGGAAGAAAAAGATATGGATGACGAATCAGGTAAGACAGCTGAATTGACAGA
TACTAAAGGTCAAGTTGTCTTTGATCATGTTTCCTTTGGTTATACTCCTGAAAAGACTATTATTCATGATTTTTCAGCTC
TTGCTAAGCCAGGTCAAAAGATTGCGATTGTTGGTCCAACAGGTGCTGGTAAGACGACTATTGTTAACTTGCTTATGAAG
TTCTATAACATCAATCAAGGCCATATCACCATTGACGGTGTGGATACTGGCGACATGAAACGTGAAACTGTCCATGATCA
ATTCTCTATGGTGCTTCAGGACACTTGGCTCTTTGAAGGTACTATTCGTGATAATTTAATTTACAACCAAGAAAATATCT
CTGACGAGCAAGTTATTGCTGCAGCCAAGGCTGTCGGTGTTCACCACTTTATCACCACACTTCCAAAAGGTTATGACACT
TATTTGGATGATTCTGTGACATTATCAGTTGGTCAGAAACAGCTCTTGACCATTGCACGTGCCCTTCTTAAGGATGCCCC
TCTTCTTATCTTGGATGAAGCGACATCATCTGTTGACACCAGAACAGAAGAATTGATTCAAAAAGCCATGGACAAACTTA
TGGAAGGTCGGACTTCCTTTGTCATTGCTCACCGCTTATCAACCATTCGAAATGCAGATCTAATCCTTGTGATGAAAGAT
GGGAATATTATTGAACAAGGAAATCATGATGAGCTTATGGCAGCAGATGGTTTCTATGCTGATCTTTATAATAGTCAATT
TACAGAAGAAGTTGCCTAA

Domains

Predicted by InterproScan.

ABC transporter transmembrane region (ABC_membrane)

(25-306)

ABC transporter (ABC_tran)

(371-516)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrQ Streptococcus mutans UA159

68.75

100

0.688

Multiple sequence alignment