Detailed information    

insolico Bioinformatically predicted

Overview


Name   ccpA   Type   Regulator
Locus tag   A6J87_RS01595 Genome accession   NZ_CP020451
Coordinates   322616..323617 (-) Length   333 a.a.
NCBI ID   WP_014634136.1    Uniprot ID   A0A1V0H5P5
Organism   Streptococcus salivarius strain FDAARGOS_259     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context


Location: 317616..328617
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  A6J87_RS01570 (A6J87_01555) - 318027..318212 (+) 186 WP_002886071.1 hypothetical protein -
  A6J87_RS01575 (A6J87_01560) eno 318365..319669 (-) 1305 WP_002886048.1 surface-displayed alpha-enolase -
  A6J87_RS01580 (A6J87_01565) - 319875..320330 (+) 456 WP_021144479.1 YueI family protein -
  A6J87_RS01585 (A6J87_01570) - 320361..321476 (-) 1116 WP_021144480.1 glycerate kinase -
  A6J87_RS01590 (A6J87_01575) - 321489..322556 (-) 1068 WP_014634137.1 MmcQ/YjbR family DNA-binding protein -
  A6J87_RS01595 (A6J87_01580) ccpA 322616..323617 (-) 1002 WP_014634136.1 catabolite control protein A Regulator
  A6J87_RS01600 (A6J87_01585) - 323930..325012 (+) 1083 WP_014634135.1 Xaa-Pro peptidase family protein -
  A6J87_RS01605 (A6J87_01590) - 325109..325477 (-) 369 WP_002886108.1 S1 RNA-binding domain-containing protein -
  A6J87_RS01610 (A6J87_01595) - 325479..326885 (-) 1407 WP_048675114.1 Cof-type HAD-IIB family hydrolase -
  A6J87_RS01615 (A6J87_01600) smpB 327032..327496 (-) 465 WP_002885905.1 SsrA-binding protein SmpB -

Sequence


Protein


Download         Length: 333 a.a.        Molecular weight: 36646.55 Da        Isoelectric Point: 5.4827

>NTDB_id=223221 A6J87_RS01595 WP_014634136.1 322616..323617(-) (ccpA) [Streptococcus salivarius strain FDAARGOS_259]
MNTDETITIYDVAREAGVSMATVSRVVNGNKNVKENTRKKVLEVIDRLDYRPNAVARGLASKKTTTVGVVIPNIANSYFA
TLARGIDDIATMYKYNIVLASSDENDDHEVTVINSLFAKQVDGIIFMGYHLTEKIRAEFSRTRTPIVLAGTVDLEHQLPS
VNIDYKAAVEDSVTQLAKNNEKVAFVSGPLIDDINGKLRLAGYKAGLEKNNLRYNEGLVFEAKYSYKDGFDLAQRVLNSG
ATAAYVGEDELAAGLLNGLFAAGKSVPEDFEIITSNDSPITSYTRPNLSSINHPLYDLGAVSMRMLTKIMNKEELEEKDV
ILNHGITLRQSTK

Nucleotide


Download         Length: 1002 bp        

>NTDB_id=223221 A6J87_RS01595 WP_014634136.1 322616..323617(-) (ccpA) [Streptococcus salivarius strain FDAARGOS_259]
ATGAATACTGATGAAACAATTACTATATACGACGTTGCGCGTGAAGCAGGTGTTTCGATGGCGACTGTGTCTCGTGTGGT
AAATGGAAATAAAAATGTAAAAGAAAACACCCGAAAAAAAGTGCTTGAGGTCATTGATCGTTTGGATTACCGTCCAAATG
CGGTTGCGCGTGGCTTGGCGAGTAAGAAAACCACTACTGTAGGAGTTGTTATTCCAAATATTGCTAATAGTTATTTTGCT
ACTTTAGCAAGGGGGATTGATGATATTGCTACGATGTACAAGTACAATATTGTTCTTGCATCTAGTGATGAAAATGACGA
TCATGAAGTTACCGTGATTAACTCTCTATTTGCCAAACAAGTAGACGGTATCATCTTCATGGGTTACCACTTGACGGAAA
AAATTCGTGCAGAATTTTCTCGTACCCGTACGCCGATTGTTCTAGCAGGAACAGTAGACCTCGAACACCAATTACCGAGT
GTTAACATCGACTATAAAGCTGCCGTTGAGGATTCTGTAACGCAGCTTGCCAAGAATAATGAAAAGGTTGCCTTTGTATC
AGGACCACTAATTGATGATATTAATGGCAAGCTCCGTCTAGCTGGTTATAAGGCTGGACTTGAAAAGAATAATTTGCGCT
ACAATGAAGGACTTGTCTTTGAAGCTAAATATAGCTATAAAGACGGCTTTGATTTAGCACAACGTGTCTTGAACTCTGGT
GCCACTGCTGCCTATGTTGGGGAAGATGAATTGGCTGCGGGTCTCTTGAATGGCCTCTTTGCTGCAGGTAAATCAGTTCC
AGAAGACTTCGAAATCATCACAAGCAATGACTCACCAATTACAAGCTACACACGTCCAAACCTTTCTAGTATTAATCATC
CTCTCTATGATTTAGGGGCAGTTAGCATGCGTATGTTGACTAAAATCATGAATAAGGAAGAGCTTGAAGAAAAAGATGTT
ATTCTTAATCACGGTATTACCTTACGTCAGTCAACAAAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A1V0H5P5

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ccpA Streptococcus gordonii str. Challis substr. CH1

77.477

100

0.775

  ccpA Streptococcus pneumoniae D39

75.976

100

0.76

  ccpA Lactococcus lactis subsp. lactis strain DGCC12653

55.891

99.399

0.556


Multiple sequence alignment