Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   A6J87_RS00150 Genome accession   NZ_CP020451
Coordinates   26468..27280 (-) Length   270 a.a.
NCBI ID   WP_080612056.1    Uniprot ID   -
Organism   Streptococcus salivarius strain FDAARGOS_259     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 21468..32280
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  A6J87_RS00125 (A6J87_00125) - 22459..22845 (-) 387 WP_002884910.1 DUF1934 domain-containing protein -
  A6J87_RS00130 (A6J87_00130) - 22937..23794 (-) 858 WP_073951140.1 GNAT family N-acetyltransferase -
  A6J87_RS00135 (A6J87_00135) yidA 23973..24782 (+) 810 WP_080611392.1 sugar-phosphatase -
  A6J87_RS00140 (A6J87_00140) - 24784..25998 (+) 1215 WP_080611393.1 aminoacyltransferase -
  A6J87_RS00145 (A6J87_00145) - 26050..26409 (-) 360 WP_045769141.1 YbaN family protein -
  A6J87_RS00150 (A6J87_00150) vicX 26468..27280 (-) 813 WP_080612056.1 MBL fold metallo-hydrolase Regulator
  A6J87_RS00155 (A6J87_00155) vicK 27286..28626 (-) 1341 WP_080611394.1 cell wall metabolism sensor histidine kinase VicK Regulator
  A6J87_RS00160 (A6J87_00160) vicR 28619..29326 (-) 708 WP_002884978.1 response regulator YycF Regulator
  A6J87_RS00165 (A6J87_00165) - 29612..30379 (+) 768 WP_002885036.1 amino acid ABC transporter ATP-binding protein -
  A6J87_RS00170 (A6J87_00170) - 30389..31222 (+) 834 WP_080611395.1 transporter substrate-binding domain-containing protein -
  A6J87_RS00175 (A6J87_00175) - 31240..31938 (+) 699 WP_080611396.1 amino acid ABC transporter permease -

Sequence

Protein


Download         Length: 270 a.a.        Molecular weight: 30088.97 Da        Isoelectric Point: 5.3499

>NTDB_id=223214 A6J87_RS00150 WP_080612056.1 26468..27280(-) (vicX) [Streptococcus salivarius strain FDAARGOS_259]
MTSDLGFKYSILASGSTGNSFYLETPEKKILVDAGLSGKKITSLLAEIDRDPSDLDAILVTHEHKDHIHGVGVLARKYGM
DIYANEKTWQIMDSKNMLGKIDNSQKHVFSRDKLLTIGDIDIESFGVSHDAIDPQFYRFMKDGKSFVMLTDTGYVSDRMA
GIIENADGYLIESNHDIEILRAGSYPWSTKQRILSDQGHLCNEDGADAMIRTIGNKTKKIYLGHLSKENNIKELAHMTME
NQLARADFGVGTDFKVYDTSPDTATPLTDI

Nucleotide


Download         Length: 813 bp        

>NTDB_id=223214 A6J87_RS00150 WP_080612056.1 26468..27280(-) (vicX) [Streptococcus salivarius strain FDAARGOS_259]
ATGACCTCAGATTTAGGGTTTAAATATAGTATTTTGGCTTCAGGGTCAACTGGTAATTCCTTTTATTTGGAGACTCCAGA
AAAGAAGATTCTTGTGGACGCTGGCTTGTCTGGTAAGAAAATCACAAGTTTGCTAGCTGAAATTGATCGTGATCCGAGTG
ATCTGGATGCTATCTTAGTTACTCATGAACACAAGGATCACATCCATGGTGTAGGCGTTTTAGCTCGTAAATATGGCATG
GATATCTACGCCAATGAGAAAACCTGGCAAATTATGGATAGTAAAAATATGCTTGGCAAGATTGATAATAGCCAGAAACA
TGTTTTTTCTCGTGACAAGCTTCTGACCATTGGGGACATTGATATTGAGTCTTTTGGAGTTAGTCACGATGCTATTGATC
CACAGTTCTATCGCTTTATGAAAGATGGAAAAAGTTTCGTCATGCTGACGGATACGGGTTATGTTTCTGATCGTATGGCA
GGTATTATTGAGAATGCTGATGGCTATCTGATTGAGTCCAATCATGATATTGAAATCCTCAGAGCAGGTTCATATCCTTG
GTCAACCAAGCAACGTATCCTCTCTGATCAAGGTCACTTGTGTAATGAAGATGGAGCGGATGCTATGATTCGTACCATTG
GTAACAAAACTAAAAAGATTTACTTGGGTCACCTTTCTAAAGAAAATAATATCAAGGAGTTGGCCCACATGACGATGGAA
AATCAGTTGGCACGTGCTGACTTTGGTGTTGGAACTGACTTCAAAGTTTATGATACCTCACCAGACACAGCGACTCCACT
GACAGATATTTAA

Domains

Predicted by InterproScan.

Beta-lactamase superfamily domain (Lactamase_B_2)

(29-214)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

77.239

99.259

0.767

Multiple sequence alignment