Detailed information NTG0222929

Bioinformatically predicted

Overview

• Name: ccpA
• Type: Regulator
• Locus tag: C2I05_RS04935
• Genome accession: NZ_CP026039
• Coordinates: 881152..882156 (-)
• Length: 334 a.a.
• NCBI ID: WP_003229285.1
• Uniprot ID: P25144
• Organism: Bacillus subtilis strain PK1_2
• Function: regulate comCDE transcription and transformation (predicted from homology) Competence regulation

Genomic Context

Location: 876152..887156

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
C2I05_RS04910 (C2I05_04890)	acuA	877079..877711 (+)	633	WP_029726417.1	acetoin utilization protein acetyltransferase AcuA	-
C2I05_RS04915 (C2I05_04895)	acuB	877738..878382 (+)	645	WP_003229294.1	acetoin utilization AcuB family protein	-
C2I05_RS04920 (C2I05_04900)	acuC	878379..879542 (+)	1164	WP_038828852.1	acetoin utilization protein AcuC	-
C2I05_RS04925 (C2I05_04905)	motS	879553..880281 (-)	729	WP_003229290.1	flagellar motor protein MotS	-
C2I05_RS04930 (C2I05_04910)	motP	880271..881089 (-)	819	WP_014477672.1	flagellar motor protein MotP	-
C2I05_RS04935 (C2I05_04915)	ccpA	881152..882156 (-)	1005	WP_003229285.1	catabolite control protein A	Regulator
C2I05_RS04940 (C2I05_04920)	aroX	882432..883508 (-)	1077	WP_003223454.1	bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismate mutase	-
C2I05_RS04945 (C2I05_04925)	ytxJ	883743..884069 (-)	327	WP_032726420.1	bacillithiol system redox-active protein YtxJ	-
C2I05_RS04950 (C2I05_04930)	ytxH	884093..884548 (-)	456	WP_004398549.1	YtxH domain-containing protein	-
C2I05_RS04955 (C2I05_04935)	ytxG	884579..885001 (-)	423	WP_003229276.1	DUF948 domain-containing protein	-
C2I05_RS04960 (C2I05_04940)	murC	885163..886461 (-)	1299	WP_003229274.1	UDP-N-acetylmuramate--L-alanine ligase	-

Sequence

Protein

• Length: 334 a.a.
• Molecular weight: 36940.34 Da
• Isoelectric Point: 5.0249

>NTDB_id=222929 C2I05_RS04935 WP_003229285.1 881152..882156(-) (ccpA) [Bacillus subtilis strain PK1_2]
MSNITIYDVAREANVSMATVSRVVNGNPNVKPTTRKKVLEAIERLGYRPNAVARGLASKKTTTVGVIIPDISSIFYSELA
RGIEDIATMYKYNIILSNSDQNMEKELHLLNTMLGKQVDGIVFMGGNITDEHVAEFKRSPVPIVLAASVEEQEETPSVAI
DYEQAIYDAVKLLVDKGHTDIAFVSGPMAEPINRSKKLQGYKRALEEANLPFNEQFVAEGDYTYDSGLEALQHLMSLDKK
PTAILSATDEMALGIIHAAQDQGLSIPEDLDIIGFDNTRLSLMVRPQLSTVVQPTYDIGAVAMRLLTKLMNKEPVEEHIV
ELPHRIELRKSTKS

Nucleotide

• Length: 1005 bp

>NTDB_id=222929 C2I05_RS04935 WP_003229285.1 881152..882156(-) (ccpA) [Bacillus subtilis strain PK1_2]
ATGAGCAATATTACGATCTACGATGTAGCGAGAGAAGCTAATGTAAGCATGGCAACCGTTTCCCGTGTCGTGAACGGCAA
CCCGAATGTAAAACCGACAACGAGGAAAAAAGTCTTGGAAGCCATTGAACGTCTCGGTTACCGTCCAAACGCGGTGGCAA
GAGGGCTGGCAAGTAAAAAAACAACAACTGTAGGTGTCATCATTCCCGATATCTCAAGCATTTTCTATTCAGAGCTTGCA
CGCGGAATTGAAGATATCGCGACAATGTATAAATACAATATTATTTTGAGCAACTCTGACCAAAACATGGAGAAAGAGCT
GCACTTGTTAAACACAATGCTCGGCAAACAAGTGGACGGCATCGTGTTTATGGGCGGAAACATTACGGACGAGCATGTGG
CGGAATTTAAGCGTTCCCCAGTGCCGATTGTACTTGCCGCTTCTGTAGAAGAGCAGGAGGAAACACCGTCAGTCGCTATC
GATTACGAACAGGCGATTTATGATGCTGTGAAGCTTTTGGTTGATAAAGGACATACAGACATCGCATTCGTTTCCGGACC
AATGGCAGAACCGATCAACCGTTCAAAAAAACTCCAAGGCTACAAACGTGCGCTTGAAGAAGCGAACCTTCCGTTTAATG
AACAATTTGTAGCTGAAGGGGATTACACATATGATTCCGGACTCGAAGCACTGCAGCATCTGATGAGCCTGGATAAAAAA
CCGACAGCCATTCTTTCTGCAACTGATGAAATGGCACTCGGCATTATCCATGCCGCTCAGGATCAGGGCTTATCCATTCC
GGAGGATCTCGACATTATCGGTTTTGATAATACAAGATTAAGCCTCATGGTTCGTCCGCAGCTTTCAACAGTTGTTCAGC
CGACATATGATATCGGCGCCGTTGCGATGAGACTGCTGACGAAGCTCATGAATAAAGAGCCGGTTGAAGAGCATATCGTC
GAACTGCCGCACCGTATAGAGCTTAGAAAGTCAACCAAGTCATAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (5-50)

• Periplasmic binding protein-like domain (Peripla_BP_3) (171-332)

3D structure

• PDB: 1ZVV
• PDB: 2FEP
• PDB: 3OQM
• PDB: 3OQN
• PDB: 3OQO

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ccpA	Streptococcus pneumoniae D39	54.545	98.802	0.539
ccpA	Streptococcus gordonii str. Challis substr. CH1	53.636	98.802	0.53
ccpA	Lactococcus lactis subsp. lactis strain DGCC12653	50.602	99.401	0.503