Detailed information NTG0222889

Bioinformatically predicted

Overview

• Name: amiA
• Type: Regulator
• Locus tag: A6J31_RS08445
• Genome accession: NZ_CP020431
• Coordinates: 1651424..1653394 (-)
• Length: 656 a.a.
• NCBI ID: WP_080610955.1
• Uniprot ID: -
• Organism: Streptococcus sp. FDAARGOS_192
• Function: internalize XIP (predicted from homology) Competence regulation

Related MGE

Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.

Gene-MGE association summary

MGE type	MGE coordinates	Gene coordinates	Relative position	Distance (bp)
IS/Tn	1653689..1654945	1651424..1653394	flank	295

Gene organization within MGE regions

Location: 1651424..1654945

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
A6J31_RS08445 (A6J31_08380)	amiA	1651424..1653394 (-)	1971	WP_080610955.1	peptide ABC transporter substrate-binding protein	Regulator
A6J31_RS08450 (A6J31_08385)	-	1653689..1654938 (+)	1250	Protein_1438	ISL3 family transposase	-

Sequence

Protein

• Length: 656 a.a.
• Molecular weight: 72801.58 Da
• Isoelectric Point: 4.9572

>NTDB_id=222889 A6J31_RS08445 WP_080610955.1 1651424..1653394(-) (amiA) [Streptococcus sp. FDAARGOS_192]
MKKSKVFLLAAVGLLSVGVLTACSSSSKTSGKTYNYVYGSDPATLDYLATNKKNMTTAVSNGVDGLFENDQYGNLKPSVA
EDWSVSQDGLTYTYKIRKGLKWYTSDGEEYANVTAKDFVTGLKHAADTNSEAIYLLQNSVKGLNDYLSGANKDFSNVGIK
AVDDYTLQYTLSQPEPYWNSKLTYSVTWPVNGDFLKSKGKDFGKSTDPTSILYNGPYLLKALTTKSSIEFTKNENYWDKD
HVYFDNIKLTYDDGSDQESLERNFTDGVYNLARLFPTSSNYSKVEKQYKDNIFYTQPGSAVEGVGINIDRQTYGHTSKEN
DQQKTSTKTALLNKDFRQSLGFAIDRTNYAAQLNGKEGGSTAVRNIFVKPDFVQADGKDFGTMVMDQLPAYGDEWSGVNL
ADSQDGLYNPEKAKAEFAKAKEALQAEGVQFPIHLDVPVNQSSKITVNQVQSIKQSVESALGKDNVVLDIHQLSADDFNN
ITYSAPNAAAEDWDLSVGVAWDPDYLDPSTYLDVLKTTSSENTKSFMGYDDPNSQAVEKVGLKEYDQLVDDASKETTDLT
ARYEKYAKAQAWLTDSALYIPTTTYNGAAAVVSRIKPFSGAYAQAGDKGSTYYFKYLKSQDDIVTKKQYDSAYKDWLKER
AKSNDKAQKDLAKHVK

Nucleotide

• Length: 1971 bp

>NTDB_id=222889 A6J31_RS08445 WP_080610955.1 1651424..1653394(-) (amiA) [Streptococcus sp. FDAARGOS_192]
ATGAAAAAGAGTAAGGTATTTTTACTAGCAGCCGTAGGCCTATTATCTGTAGGTGTTTTAACGGCTTGCTCGTCATCAAG
TAAGACGTCTGGTAAGACTTATAATTATGTCTATGGTAGTGACCCTGCAACCTTGGACTATCTTGCTACAAACAAGAAAA
ATATGACTACAGCTGTTAGTAACGGTGTTGATGGTTTGTTTGAAAATGACCAATATGGGAATTTAAAACCTTCTGTCGCT
GAAGACTGGTCTGTTTCTCAAGATGGTTTGACCTATACTTACAAGATTCGTAAGGGACTTAAATGGTACACTTCAGATGG
CGAAGAATATGCCAATGTAACAGCTAAGGACTTTGTAACAGGTCTTAAGCATGCTGCGGATACAAATTCTGAAGCGATTT
ATTTGCTACAAAACTCAGTTAAGGGCTTGAATGATTACCTTTCAGGTGCCAACAAGGACTTTTCAAATGTAGGTATCAAG
GCTGTTGATGATTACACCTTGCAATATACACTTAGTCAACCAGAACCTTACTGGAATTCAAAATTGACTTACTCTGTTAC
TTGGCCTGTTAATGGAGACTTCTTGAAATCTAAAGGTAAAGATTTTGGTAAGTCAACAGACCCAACATCTATTCTTTATA
ACGGTCCATACCTTCTTAAGGCTTTGACAACGAAGTCATCTATTGAGTTCACCAAGAATGAAAACTATTGGGATAAGGAT
CACGTCTATTTTGATAATATCAAATTGACTTATGATGATGGATCAGACCAAGAGTCTTTGGAACGCAACTTTACAGATGG
TGTATACAACTTAGCACGTCTATTCCCAACAAGTTCTAACTATTCCAAAGTTGAAAAACAGTACAAAGATAATATTTTCT
ATACGCAACCTGGATCAGCTGTAGAAGGTGTTGGTATTAATATTGACCGTCAAACTTATGGTCATACATCTAAAGAAAAT
GACCAGCAAAAGACATCAACTAAGACAGCTCTTCTCAATAAGGATTTCCGTCAATCATTAGGTTTTGCCATTGACCGTAC
AAATTACGCCGCACAACTTAATGGTAAGGAAGGTGGAAGTACTGCCGTCCGTAATATCTTTGTTAAACCAGACTTTGTTC
AAGCAGATGGTAAGGACTTCGGAACAATGGTAATGGATCAACTTCCAGCTTATGGTGATGAGTGGTCTGGTGTGAATCTT
GCAGATAGTCAAGATGGTCTTTATAACCCAGAAAAAGCTAAGGCTGAATTTGCTAAAGCCAAAGAAGCTCTTCAAGCAGA
AGGAGTTCAGTTCCCAATTCATTTGGATGTCCCTGTTAATCAATCAAGTAAAATTACTGTGAATCAGGTACAATCAATTA
AACAGTCTGTTGAATCTGCTCTTGGAAAAGACAATGTTGTGCTTGATATCCACCAATTGTCAGCTGATGATTTTAACAAC
ATCACTTACTCTGCACCAAATGCAGCTGCAGAAGATTGGGACTTGTCAGTGGGTGTGGCTTGGGACCCTGATTACCTTGA
TCCTTCAACTTATCTTGATGTCTTGAAAACGACAAGTAGCGAAAATACTAAATCCTTCATGGGTTATGACGATCCAAATA
GTCAAGCGGTTGAAAAAGTAGGTCTTAAAGAATATGACCAATTGGTTGATGATGCTTCTAAGGAAACAACAGACTTGACG
GCTCGTTATGAAAAATATGCAAAAGCTCAGGCATGGTTGACGGATAGTGCACTTTATATCCCAACGACTACTTATAACGG
TGCAGCCGCTGTAGTTTCTCGTATTAAGCCATTCTCAGGAGCTTATGCTCAAGCTGGTGATAAAGGTTCTACATACTACT
TCAAGTATCTTAAATCTCAAGATGATATTGTAACTAAGAAACAATACGACTCAGCTTATAAAGATTGGCTTAAAGAAAGA
GCGAAATCTAATGACAAAGCTCAAAAAGATCTTGCCAAACACGTTAAGTAA

Domains

Predicted by InterproScan.

• Bacterial extracellular solute-binding proteins, family 5 Middle (SBP_bac_5) (75-520)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiA	Streptococcus salivarius strain HSISS4	69.817	100	0.698
amiA3	Streptococcus thermophilus LMD-9	68.645	100	0.687
amiA3	Streptococcus thermophilus LMG 18311	67.884	100	0.68