Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptB   Type   Regulator
Locus tag   A6J31_RS07210 Genome accession   NZ_CP020431
Coordinates   1402644..1403678 (-) Length   344 a.a.
NCBI ID   WP_413081395.1    Uniprot ID   -
Organism   Streptococcus sp. FDAARGOS_192     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1397644..1408678
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  A6J31_RS07185 (A6J31_07115) ilvD 1397915..1399633 (-) 1719 WP_021143714.1 dihydroxy-acid dehydratase -
  A6J31_RS07190 (A6J31_07120) - 1399746..1400927 (+) 1182 WP_014634936.1 NAD(P)/FAD-dependent oxidoreductase -
  A6J31_RS07200 (A6J31_07130) trmB 1401144..1401785 (-) 642 WP_003096317.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  A6J31_RS07205 (A6J31_07135) ccrZ 1401795..1402586 (-) 792 WP_002884270.1 cell cycle regulator CcrZ -
  A6J31_RS07210 (A6J31_07140) pptB 1402644..1403678 (-) 1035 WP_413081395.1 ABC transporter permease Regulator
  A6J31_RS07215 (A6J31_07145) pptA 1403678..1404409 (-) 732 WP_080610806.1 ABC transporter ATP-binding protein Regulator
  A6J31_RS07220 (A6J31_07150) - 1404474..1404893 (+) 420 WP_004183267.1 HIT family protein -
  A6J31_RS07225 (A6J31_07155) - 1404890..1405189 (+) 300 WP_080610807.1 hypothetical protein -
  A6J31_RS07230 (A6J31_07160) - 1405376..1406578 (-) 1203 WP_080610199.1 IS110 family transposase -
  A6J31_RS07240 (A6J31_07170) - 1406857..1408106 (-) 1250 Protein_1209 ISL3 family transposase -

Sequence

Protein


Download         Length: 344 a.a.        Molecular weight: 39903.37 Da        Isoelectric Point: 10.5822

>NTDB_id=222883 A6J31_RS07210 WP_413081395.1 1402644..1403678(-) (pptB) [Streptococcus sp. FDAARGOS_192]
MAKLFKERSKRFNARCAKYSRYVFNDHFILVLLFLLGFVLVQYSQLLKHFPKNPWAIILGLLVLCLLLPFWGNIATYLEP
ADKHYLLVKEEEVLDHVKKATGRAFRFWVIVQTLIFILVIPLFLALGLPVWGVILVAVAMAILKYFIFQKKAQPFYKQSG
LNWTEAIAAENKRQQSILKFFSLFTNVKGITSSVKRRAYLDGILKRTKKDKEHTWYNLYLRAFLRSGDYFALSLRLFALT
LLVIFLVPEKWLAMVLVVVFDYLLLFQLTALKSHFAYQRMANLMPVGKDMQVSNLKRLISQIVLGMTLVQAICLFDLKFS
LILVGMMLVLSLVYLPAKLKKMID

Nucleotide


Download         Length: 1035 bp        

>NTDB_id=222883 A6J31_RS07210 WP_413081395.1 1402644..1403678(-) (pptB) [Streptococcus sp. FDAARGOS_192]
ATAGCTAAGCTATTTAAGGAGCGTAGCAAGCGATTTAATGCCCGCTGTGCTAAGTATAGTCGCTACGTTTTTAATGATCA
TTTTATCTTGGTTCTTCTCTTTCTGCTAGGCTTTGTCTTGGTTCAGTATAGCCAGTTGCTGAAGCATTTTCCAAAAAATC
CGTGGGCAATCATTCTTGGCTTGCTTGTGCTTTGTCTGTTATTACCTTTCTGGGGGAATATTGCGACTTATCTAGAACCT
GCGGACAAGCACTACCTTTTGGTTAAGGAAGAAGAGGTGCTAGACCATGTTAAGAAGGCAACAGGGCGTGCTTTTAGATT
TTGGGTAATAGTACAAACCCTGATTTTTATTTTGGTTATTCCGCTCTTTTTAGCCTTGGGACTTCCAGTTTGGGGAGTTA
TCCTTGTAGCTGTGGCTATGGCTATTCTTAAGTACTTCATTTTTCAGAAAAAGGCTCAACCTTTTTATAAGCAGTCTGGA
CTGAATTGGACTGAGGCTATTGCAGCGGAAAATAAGCGTCAACAATCGATTCTGAAGTTCTTTTCACTCTTTACCAATGT
TAAAGGGATTACGTCGAGTGTTAAACGCCGTGCTTATTTGGATGGTATTCTCAAACGTACAAAGAAAGACAAGGAACATA
CTTGGTACAATCTTTACCTAAGAGCCTTCTTGCGTTCTGGGGATTACTTTGCCCTTAGTTTACGCCTGTTTGCCCTAACA
CTTCTAGTTATCTTTTTGGTTCCTGAAAAATGGTTGGCTATGGTGCTTGTGGTTGTTTTTGATTACCTCTTGCTCTTTCA
GCTCACGGCACTTAAATCGCACTTTGCTTATCAGAGAATGGCTAACCTTATGCCAGTTGGAAAAGACATGCAGGTAAGCA
ATCTTAAGCGCTTGATTAGCCAGATTGTACTTGGGATGACTCTGGTACAGGCTATTTGTCTCTTCGACCTTAAGTTTAGC
CTGATTTTGGTTGGAATGATGCTAGTTCTGAGCCTTGTTTACCTACCAGCCAAGCTTAAGAAGATGATTGACTAA

Domains

Predicted by InterproScan.

Bacterial ABC transporter protein EcsB (EcsB)

(157-329)

Bacterial ABC transporter protein EcsB (EcsB)

(3-159)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptB Streptococcus salivarius strain HSISS4

97.965

100

0.98
  pptB Streptococcus thermophilus LMD-9

93.314

100

0.933

Multiple sequence alignment