Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   A6J31_RS07215 Genome accession   NZ_CP020431
Coordinates   1403678..1404409 (-) Length   243 a.a.
NCBI ID   WP_080610806.1    Uniprot ID   A0A1V0GE99
Organism   Streptococcus sp. FDAARGOS_192     
Function   export ComS (predicted from homology)   
Competence regulation

Related MGE

Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.

Gene-MGE association summary

MGE type MGE coordinates Gene coordinates Relative position Distance (bp)
IScluster/Tn 1405376..1408106 1403678..1404409 flank 967


Gene organization within MGE regions


Location: 1403678..1408106
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  A6J31_RS07215 (A6J31_07145) pptA 1403678..1404409 (-) 732 WP_080610806.1 ABC transporter ATP-binding protein Regulator
  A6J31_RS07220 (A6J31_07150) - 1404474..1404893 (+) 420 WP_004183267.1 HIT family protein -
  A6J31_RS07225 (A6J31_07155) - 1404890..1405189 (+) 300 WP_080610807.1 hypothetical protein -
  A6J31_RS07230 (A6J31_07160) - 1405376..1406578 (-) 1203 WP_080610199.1 IS110 family transposase -
  A6J31_RS07240 (A6J31_07170) - 1406857..1408106 (-) 1250 Protein_1209 ISL3 family transposase -

Sequence

Protein


Download         Length: 243 a.a.        Molecular weight: 26856.13 Da        Isoelectric Point: 4.4799

>NTDB_id=222884 A6J31_RS07215 WP_080610806.1 1403678..1404409(-) (pptA) [Streptococcus sp. FDAARGOS_192]
MLKLEKVTGGYANIPVLKDVTFEVADGELVGLIGLNGAGKSTTINEIIGLLTPYGGQIAIDGLTIQQDPASYRQKIGYIP
ETPSLYEELTLREHLETVLMAYGLDVTEGMARADKYLKIFRLDEKLDWFPTQFSKGMKQKVMIICAFIVNPSLFIVDEPF
LGLDPLAISDLIELLAEEKAKGKAILMSTHVLDSAEKMCDRFVILHHGQVLAQGTLEELRQTFGDDSASLNDIYMQLTKG
ELS

Nucleotide


Download         Length: 732 bp        

>NTDB_id=222884 A6J31_RS07215 WP_080610806.1 1403678..1404409(-) (pptA) [Streptococcus sp. FDAARGOS_192]
ATGCTTAAATTAGAAAAGGTGACGGGTGGTTACGCTAATATTCCCGTCCTAAAAGATGTGACTTTTGAGGTGGCTGATGG
TGAATTGGTTGGTCTCATTGGTCTTAATGGTGCTGGGAAATCAACAACAATTAACGAGATTATTGGTCTCTTAACACCTT
ATGGGGGACAGATTGCCATTGATGGGTTAACTATTCAACAAGATCCAGCTAGCTATCGTCAGAAGATTGGCTATATTCCT
GAAACGCCAAGTCTCTATGAAGAGTTGACGCTTCGTGAACATTTGGAAACGGTGTTGATGGCCTATGGTCTTGATGTGAC
TGAGGGGATGGCACGTGCGGACAAGTACCTCAAAATCTTTCGATTAGATGAAAAATTGGACTGGTTCCCGACTCAGTTTT
CAAAGGGAATGAAGCAGAAGGTTATGATTATCTGTGCCTTTATTGTTAACCCCAGTCTTTTCATTGTTGATGAACCCTTC
TTGGGTTTGGATCCCTTGGCAATCTCCGACCTAATTGAGCTTTTAGCTGAGGAAAAAGCTAAGGGTAAGGCGATTCTCAT
GTCTACCCACGTTTTGGATTCAGCTGAGAAGATGTGTGATCGCTTTGTGATCTTGCATCACGGTCAAGTCTTAGCACAGG
GGACTCTCGAGGAGCTCCGTCAGACTTTTGGCGACGATAGTGCTAGTCTTAACGATATCTACATGCAGTTAACTAAGGGA
GAATTGTCATGA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(17-160)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A1V0GE99

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

99.177

100

0.992
  pptA Streptococcus thermophilus LMD-9

97.119

100

0.971

Multiple sequence alignment