Detailed information NTG0222829

Bioinformatically predicted

Overview

• Name: rapC
• Type: Regulator
• Locus tag: C2H97_RS12815
• Genome accession: NZ_CP026038
• Coordinates: 2450622..2451749 (-)
• Length: 375 a.a.
• NCBI ID: WP_249848351.1
• Uniprot ID: -
• Organism: Bacillus subtilis PY79 strain PK1_3
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 2445622..2456749

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
C2H97_RS12795	-	2445700..2446092 (-)	393	WP_080265325.1	recombinase family protein	-
C2H97_RS12800 (C2H97_12820)	-	2446546..2446755 (-)	210	WP_014479083.1	hypothetical protein	-
C2H97_RS12805 (C2H97_12825)	-	2446989..2450006 (+)	3018	WP_249848353.1	SIR2 family protein	-
C2H97_RS12810 (C2H97_12830)	-	2450435..2450632 (-)	198	WP_014479085.1	hypothetical protein	-
C2H97_RS12815 (C2H97_12835)	rapC	2450622..2451749 (-)	1128	WP_249848351.1	Rap family tetratricopeptide repeat protein	Regulator
C2H97_RS12820 (C2H97_12840)	-	2451939..2452229 (-)	291	WP_249848349.1	hypothetical protein	-
C2H97_RS12825 (C2H97_12845)	-	2452296..2452502 (-)	207	WP_249848434.1	hypothetical protein	-
C2H97_RS12830 (C2H97_12850)	-	2452731..2453201 (-)	471	WP_045926655.1	antitoxin YezG family protein	-
C2H97_RS12835 (C2H97_12855)	-	2453279..2453749 (-)	471	WP_077671613.1	antitoxin YezG family protein	-
C2H97_RS12840 (C2H97_12860)	yeeF	2453754..2455760 (-)	2007	WP_249848347.1	LXG family T7SS effector deoxyribonuclease toxin YeeF	-
C2H97_RS12845 (C2H97_12865)	-	2455927..2456265 (+)	339	WP_075749485.1	hypothetical protein	-

Sequence

Protein

• Length: 375 a.a.
• Molecular weight: 44327.05 Da
• Isoelectric Point: 6.9585

>NTDB_id=222829 C2H97_RS12815 WP_249848351.1 2450622..2451749(-) (rapC) [Bacillus subtilis PY79 strain PK1_3]
MGTISSPHVGMKINEWNRHIQKFNVTDAEMLKAEIERDIDVMEEDQDLLIYYQLIAFRHQLMIDYVIPSEGNQMELSEYL
KRIEGSNRKMEKLVEYYYYFFQGMYEFKEGNFLSAITFYQKAENTIPYISDEIERAEFYFKMAEVFYHMKQTHVSMHYSS
QAYNIYKTHDLYSVRRIQCHFVIAGNYDDLESHEKALPHLEQALKGARLLESKNKRIYGQALFNIGNCYLKMGELTKAAK
YMEKSILQFKKSNFNNLTQAYHDLALIYFLQHKQDQAMDCFRKGVRFACKFGDNLFKIMFEGLQALFIKKGEASILLNVF
NKLETSQGYPYMEELALLAAKFYTEIGQMDDSVICFKKMVHARKQIQRGDCLYEI

Nucleotide

• Length: 1128 bp

>NTDB_id=222829 C2H97_RS12815 WP_249848351.1 2450622..2451749(-) (rapC) [Bacillus subtilis PY79 strain PK1_3]
TTGGGCACGATTTCGTCTCCGCACGTTGGGATGAAAATTAATGAGTGGAACCGGCATATTCAAAAGTTTAATGTGACTGA
CGCTGAAATGCTTAAAGCTGAGATCGAGCGGGACATTGACGTCATGGAAGAAGACCAAGACCTCTTGATTTACTATCAGC
TCATTGCATTTCGCCATCAGCTTATGATTGACTATGTGATTCCATCTGAAGGAAACCAAATGGAGTTATCAGAATATTTA
AAGAGAATTGAAGGCAGCAACAGGAAGATGGAGAAGCTCGTTGAATACTACTATTACTTTTTTCAAGGAATGTATGAATT
CAAAGAGGGCAATTTCTTAAGTGCCATTACATTCTATCAAAAAGCGGAAAATACAATTCCTTATATTTCAGATGAAATCG
AGCGGGCAGAATTTTATTTTAAAATGGCTGAAGTGTTTTATCATATGAAACAAACCCACGTATCCATGCACTATTCTTCT
CAGGCGTATAACATCTATAAAACGCACGATCTTTACTCAGTCCGCCGCATACAATGCCATTTTGTGATCGCAGGTAACTA
CGACGATTTAGAAAGTCATGAAAAGGCACTCCCTCACCTCGAGCAGGCGCTAAAAGGCGCACGACTGCTTGAAAGCAAAA
ACAAGCGGATTTACGGCCAAGCTTTATTCAATATCGGAAATTGTTACCTTAAAATGGGCGAATTGACGAAAGCAGCAAAA
TACATGGAGAAATCGATACTCCAATTTAAAAAATCAAATTTCAACAACTTGACACAAGCTTACCACGATTTAGCCTTAAT
TTATTTTCTTCAACATAAACAAGACCAAGCAATGGATTGTTTCAGAAAAGGCGTACGCTTCGCATGTAAATTCGGCGATA
ACCTATTTAAAATCATGTTTGAAGGATTGCAGGCGCTGTTTATCAAAAAAGGAGAAGCATCCATTTTATTAAATGTTTTC
AACAAATTAGAGACATCCCAAGGATATCCTTATATGGAAGAGTTGGCATTATTAGCCGCAAAGTTTTATACTGAAATTGG
GCAGATGGATGATTCTGTTATCTGTTTCAAAAAGATGGTTCATGCCCGCAAACAAATTCAGAGAGGGGATTGTTTGTATG
AAATTTAA

Domains

Predicted by InterProScan.

• Tetratricopeptide repeat (TPR_12) (221-287)

• response regulator aspartate phosphatase H, N terminal (RapH_N) (3-64)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapC	Bacillus subtilis subsp. subtilis str. 168	41.689	100	0.421
rapF	Bacillus subtilis subsp. subtilis str. 168	39.314	100	0.397