Detailed information NTG0222812

Bioinformatically predicted

Overview

• Name: rapF
• Type: Regulator
• Locus tag: C2H97_RS10570
• Genome accession: NZ_CP026038
• Coordinates: 1996684..1997805 (+)
• Length: 373 a.a.
• NCBI ID: WP_015715201.1
• Uniprot ID: -
• Organism: Bacillus subtilis PY79 strain PK1_3
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 1991684..2002805

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
C2H97_RS10545 (C2H97_10580)	ycdA	1991689..1992753 (-)	1065	WP_003234750.1	DUF4352 domain-containing protein	-
C2H97_RS10550	-	1992776..1992907 (-)	132	WP_003246334.1	hypothetical protein	-
C2H97_RS10555 (C2H97_10585)	ycdB	1993081..1994502 (+)	1422	WP_032724851.1	YcdB/YcdC domain-containing protein	-
C2H97_RS10560 (C2H97_10595)	ycdC	1994689..1996050 (+)	1362	WP_032724933.1	YcdB/YcdC domain-containing protein	-
C2H97_RS10565 (C2H97_10600)	cwlK	1996058..1996561 (-)	504	WP_032724854.1	peptidoglycan L-alanyl-D-glutamate endopeptidase CwlK	-
C2H97_RS10570 (C2H97_10605)	rapF	1996684..1997805 (+)	1122	WP_015715201.1	response regulator aspartate phosphatase RapJ	Regulator
C2H97_RS10575 (C2H97_10610)	ycdF	1997912..1998688 (+)	777	WP_032724857.1	SDR family oxidoreductase	-
C2H97_RS10580 (C2H97_10615)	ycdG	1998713..2000398 (+)	1686	WP_120027752.1	alpha-glucosidase	-
C2H97_RS10585 (C2H97_10620)	znuA	2000586..2001545 (+)	960	WP_003234733.1	metal ABC transporter substrate-binding protein	-
C2H97_RS10590 (C2H97_10625)	znuC	2001600..2002295 (+)	696	WP_014475714.1	zinc ABC transporter ATP-binding protein ZnuC	-

Sequence

Protein

• Length: 373 a.a.
• Molecular weight: 44400.29 Da
• Isoelectric Point: 4.8344

>NTDB_id=222812 C2H97_RS10570 WP_015715201.1 1996684..1997805(+) (rapF) [Bacillus subtilis PY79 strain PK1_3]
MRAKIPSEEVAVKLNEWYKLIRAFEADQAEALKQEIEYDLEDMEENQDLLLYFSLMEFRHRIMLDKLMPVKDSDTKPPFS
DMLNEIESNQQKLTGLLEYYFYYFRGMYEFKQKNFILAIDHYKHAEEKLEYVEDEIEKAEFLFKVAEVYYHIKQTYFSMN
YASQALDIYTKYELYGRRRVQCEFIIAGNLTDVYHHEKALTHLCSALDHARQLEEAYMIAAAYYNVGHCKYSLGDYKEAE
GYFKTAAAIFEEHNFQQAVQAVFSLTHIYCKEGKYDKAVEAYDRGIKSAAEWEDDMYLTKFRLIHELYLGSGDLNVLTEC
FDLLESRQLLADAEDLLHDTAERFNQLEHYESAAFFYRRLMNIKKKLAEQRFQ

Nucleotide

• Length: 1122 bp

>NTDB_id=222812 C2H97_RS10570 WP_015715201.1 1996684..1997805(+) (rapF) [Bacillus subtilis PY79 strain PK1_3]
ATGAGAGCAAAGATTCCATCAGAAGAAGTAGCAGTAAAGCTGAATGAATGGTACAAGCTCATTCGCGCATTTGAAGCAGA
TCAAGCAGAAGCGTTAAAACAGGAGATTGAATACGATTTAGAAGATATGGAAGAGAACCAGGACTTGCTTTTATATTTTT
CTTTGATGGAATTCCGGCATCGAATCATGCTTGATAAGCTGATGCCGGTGAAAGACAGCGACACCAAGCCTCCATTCTCT
GATATGCTGAACGAAATTGAAAGCAATCAGCAAAAACTCACGGGCTTATTGGAATATTACTTTTATTATTTCAGAGGAAT
GTACGAATTCAAGCAGAAAAATTTCATATTAGCGATTGACCATTATAAACATGCCGAGGAAAAGCTCGAGTATGTCGAGG
ATGAGATCGAAAAAGCTGAGTTTCTTTTTAAAGTCGCAGAAGTGTATTATCACATTAAACAAACGTATTTTTCCATGAAT
TATGCGAGCCAGGCGCTTGATATCTATACGAAATATGAACTGTACGGTCGCCGCCGGGTTCAGTGTGAATTTATCATCGC
CGGAAATTTGACCGATGTGTATCATCATGAAAAAGCACTGACCCACTTGTGCAGCGCTTTAGATCATGCCAGGCAGCTTG
AAGAAGCGTACATGATCGCCGCTGCCTATTATAATGTCGGACACTGTAAGTACAGTCTGGGTGATTACAAAGAAGCGGAG
GGCTATTTCAAAACAGCCGCCGCCATTTTTGAGGAGCACAACTTTCAGCAAGCTGTTCAAGCTGTATTTTCACTGACCCA
TATCTACTGTAAAGAGGGAAAATACGACAAGGCAGTAGAGGCGTATGACCGCGGGATAAAGAGCGCGGCTGAATGGGAGG
ATGACATGTACTTGACGAAATTCCGCCTCATTCATGAGCTGTATCTTGGAAGCGGCGACCTGAACGTGCTTACAGAATGC
TTTGACCTGCTGGAATCCAGGCAGCTTCTTGCCGACGCCGAAGATCTGCTGCATGATACAGCGGAACGTTTCAATCAGCT
GGAACATTACGAGTCCGCCGCTTTCTTTTACCGCAGGCTGATGAATATTAAAAAGAAGCTTGCCGAGCAGCGTTTTCAAT
AG

Domains

Predicted by InterProScan.

• response regulator aspartate phosphatase H, N terminal (RapH_N) (4-65)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapF	Bacillus subtilis subsp. subtilis str. 168	42.391	98.66	0.418
rapC	Bacillus subtilis subsp. subtilis str. 168	41.257	98.123	0.405