Detailed information
Bioinformatically predicted
Overview
| Name | ymcA | Type | Regulator |
| Locus tag | C2H93_RS07340 | Genome accession | NZ_CP026036 |
| Coordinates | 1420509..1420940 (+) | Length | 143 a.a. |
| NCBI ID | WP_003231834.1 | Uniprot ID | G4NVD0 |
| Organism | Bacillus subtilis strain PK5_16 | ||
| Function | accelerate the production of Spo0A~P (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1415509..1425940
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C2H93_RS07320 (C2H93_07335) | spoVS | 1416071..1416331 (+) | 261 | WP_003154135.1 | stage V sporulation protein SpoVS | - |
| C2H93_RS07325 (C2H93_07340) | tdh | 1416596..1417639 (+) | 1044 | WP_049140039.1 | L-threonine 3-dehydrogenase | - |
| C2H93_RS07330 (C2H93_07345) | kbl | 1417652..1418830 (+) | 1179 | WP_015715903.1 | glycine C-acetyltransferase | - |
| C2H93_RS07335 (C2H93_07350) | miaB | 1418978..1420507 (+) | 1530 | WP_049140040.1 | tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB | - |
| C2H93_RS07340 (C2H93_07355) | ymcA | 1420509..1420940 (+) | 432 | WP_003231834.1 | regulatory iron-sulfur-containing complex subunit RicA | Regulator |
| C2H93_RS07345 (C2H93_07360) | cotE | 1421202..1421747 (+) | 546 | WP_003231833.1 | outer spore coat protein CotE | - |
| C2H93_RS07350 (C2H93_07365) | hexA | 1421880..1424456 (+) | 2577 | WP_151870238.1 | DNA mismatch repair protein MutS | Machinery gene |
Sequence
Protein
Download Length: 143 a.a. Molecular weight: 16166.27 Da Isoelectric Point: 5.0437
>NTDB_id=222498 C2H93_RS07340 WP_003231834.1 1420509..1420940(+) (ymcA) [Bacillus subtilis strain PK5_16]
MTLYSKKDIVQQARNLAKMISETEEVDFFKRAEAQINENDKVSTIVNQIKALQKQAVNLKHYEKHEALKQVEAKIDALQE
ELEEIPVIQEFRDSQMEVNDLLQLVAHTISNQVTNEIITSTGGDLLKGETGSKVKHSNNSCSL
MTLYSKKDIVQQARNLAKMISETEEVDFFKRAEAQINENDKVSTIVNQIKALQKQAVNLKHYEKHEALKQVEAKIDALQE
ELEEIPVIQEFRDSQMEVNDLLQLVAHTISNQVTNEIITSTGGDLLKGETGSKVKHSNNSCSL
Nucleotide
Download Length: 432 bp
>NTDB_id=222498 C2H93_RS07340 WP_003231834.1 1420509..1420940(+) (ymcA) [Bacillus subtilis strain PK5_16]
ATGACGCTCTACTCAAAAAAAGACATTGTGCAGCAGGCACGAAACCTTGCAAAAATGATTTCTGAAACAGAAGAGGTTGA
TTTTTTCAAACGGGCTGAAGCGCAAATCAATGAGAATGACAAAGTGTCCACAATCGTTAATCAGATTAAAGCCCTGCAAA
AGCAGGCTGTCAATCTGAAGCATTATGAAAAGCATGAAGCGCTCAAACAAGTAGAAGCAAAAATTGACGCGCTGCAAGAA
GAGCTTGAAGAGATTCCTGTTATCCAGGAATTCAGAGACTCGCAGATGGAAGTAAATGACCTATTGCAGCTCGTTGCACA
CACCATTTCCAACCAAGTCACAAATGAAATCATCACATCAACCGGAGGCGACCTGCTGAAAGGGGAAACCGGTTCAAAGG
TGAAGCATTCAAATAACAGTTGTTCTCTCTAA
ATGACGCTCTACTCAAAAAAAGACATTGTGCAGCAGGCACGAAACCTTGCAAAAATGATTTCTGAAACAGAAGAGGTTGA
TTTTTTCAAACGGGCTGAAGCGCAAATCAATGAGAATGACAAAGTGTCCACAATCGTTAATCAGATTAAAGCCCTGCAAA
AGCAGGCTGTCAATCTGAAGCATTATGAAAAGCATGAAGCGCTCAAACAAGTAGAAGCAAAAATTGACGCGCTGCAAGAA
GAGCTTGAAGAGATTCCTGTTATCCAGGAATTCAGAGACTCGCAGATGGAAGTAAATGACCTATTGCAGCTCGTTGCACA
CACCATTTCCAACCAAGTCACAAATGAAATCATCACATCAACCGGAGGCGACCTGCTGAAAGGGGAAACCGGTTCAAAGG
TGAAGCATTCAAATAACAGTTGTTCTCTCTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ymcA | Bacillus subtilis subsp. subtilis str. 168 |
100 |
100 |
1 |