Detailed information
Bioinformatically predicted
Overview
| Name | pilN | Type | Machinery gene |
| Locus tag | A6J43_RS10370 | Genome accession | NZ_CP020415 |
| Coordinates | 1769011..1769610 (+) | Length | 199 a.a. |
| NCBI ID | WP_010356666.1 | Uniprot ID | - |
| Organism | Neisseria gonorrhoeae strain FDAARGOS_204 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1764011..1774610
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| A6J43_RS10355 (A6J43_10360) | yihA | 1764596..1765225 (+) | 630 | WP_003687358.1 | ribosome biogenesis GTP-binding protein YihA/YsxC | - |
| A6J43_RS10360 (A6J43_10365) | - | 1765345..1767741 (-) | 2397 | WP_003687357.1 | penicillin-binding protein 1A | - |
| A6J43_RS10365 (A6J43_10370) | pilM | 1767893..1769008 (+) | 1116 | WP_003687356.1 | type IV pilus biogenesis protein PilM | - |
| A6J43_RS10370 (A6J43_10375) | pilN | 1769011..1769610 (+) | 600 | WP_010356666.1 | PilN domain-containing protein | Machinery gene |
| A6J43_RS10375 (A6J43_10380) | - | 1769611..1770258 (+) | 648 | WP_003690570.1 | type 4a pilus biogenesis protein PilO | - |
| A6J43_RS10380 (A6J43_10385) | pilP | 1770276..1770821 (+) | 546 | WP_003692554.1 | pilus assembly protein PilP | Machinery gene |
| A6J43_RS10385 (A6J43_10390) | pilQ | 1770840..1773014 (+) | 2175 | WP_082277635.1 | type IV pilus secretin PilQ | Machinery gene |
Sequence
Protein
Download Length: 199 a.a. Molecular weight: 22255.59 Da Isoelectric Point: 9.7317
>NTDB_id=222497 A6J43_RS10370 WP_010356666.1 1769011..1769610(+) (pilN) [Neisseria gonorrhoeae strain FDAARGOS_204]
MNNLIKINLLPYREEMNKRKQQQFKTLMYGAVLTGVAAVAATYLFIDNMINKQSEKNTLLEISIAHLDTELSEIQKLKQE
KDAFLIKKNKIEELQIKRLQAAKILDSLNEAVPGSTYLTSLDAVTADSYRLSGRTSSDNRVAAMMRAMPNTGIFKQPELL
SIKKNNSHQEFTLQATLQPIVKAAESKENPASGNAQEAN
MNNLIKINLLPYREEMNKRKQQQFKTLMYGAVLTGVAAVAATYLFIDNMINKQSEKNTLLEISIAHLDTELSEIQKLKQE
KDAFLIKKNKIEELQIKRLQAAKILDSLNEAVPGSTYLTSLDAVTADSYRLSGRTSSDNRVAAMMRAMPNTGIFKQPELL
SIKKNNSHQEFTLQATLQPIVKAAESKENPASGNAQEAN
Nucleotide
Download Length: 600 bp
>NTDB_id=222497 A6J43_RS10370 WP_010356666.1 1769011..1769610(+) (pilN) [Neisseria gonorrhoeae strain FDAARGOS_204]
ATGAACAATTTAATCAAAATCAACCTCCTCCCCTACAGGGAAGAGATGAACAAACGCAAACAGCAGCAGTTTAAAACGCT
GATGTACGGTGCCGTGCTGACGGGCGTTGCCGCCGTTGCGGCAACCTACCTGTTTATCGACAATATGATCAATAAACAGT
CGGAAAAAAACACGCTGCTGGAAATCTCCATCGCACACTTGGATACCGAGCTGTCGGAAATACAAAAGCTCAAACAGGAA
AAAGATGCCTTCCTGATTAAGAAAAACAAAATCGAGGAGCTCCAGATCAAACGCCTCCAAGCCGCAAAAATCCTCGACAG
CCTGAATGAGGCCGTCCCCGGAAGCACCTACCTAACCTCGCTGGATGCCGTTACCGCCGACTCTTATCGGCTCAGCGGCA
GGACATCCAGCGACAACCGCGTTGCCGCCATGATGAGGGCGATGCCCAATACCGGCATATTCAAGCAACCCGAATTGTTA
AGCATCAAGAAAAACAATTCGCATCAAGAATTTACCCTTCAGGCAACATTACAACCTATCGTAAAGGCGGCCGAATCCAA
AGAGAATCCGGCTTCGGGAAACGCACAGGAGGCAAACTGA
ATGAACAATTTAATCAAAATCAACCTCCTCCCCTACAGGGAAGAGATGAACAAACGCAAACAGCAGCAGTTTAAAACGCT
GATGTACGGTGCCGTGCTGACGGGCGTTGCCGCCGTTGCGGCAACCTACCTGTTTATCGACAATATGATCAATAAACAGT
CGGAAAAAAACACGCTGCTGGAAATCTCCATCGCACACTTGGATACCGAGCTGTCGGAAATACAAAAGCTCAAACAGGAA
AAAGATGCCTTCCTGATTAAGAAAAACAAAATCGAGGAGCTCCAGATCAAACGCCTCCAAGCCGCAAAAATCCTCGACAG
CCTGAATGAGGCCGTCCCCGGAAGCACCTACCTAACCTCGCTGGATGCCGTTACCGCCGACTCTTATCGGCTCAGCGGCA
GGACATCCAGCGACAACCGCGTTGCCGCCATGATGAGGGCGATGCCCAATACCGGCATATTCAAGCAACCCGAATTGTTA
AGCATCAAGAAAAACAATTCGCATCAAGAATTTACCCTTCAGGCAACATTACAACCTATCGTAAAGGCGGCCGAATCCAA
AGAGAATCCGGCTTCGGGAAACGCACAGGAGGCAAACTGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilN | Neisseria meningitidis strain C311 |
97.99 |
100 |
0.98 |