Detailed information NTG0222401

Bioinformatically predicted

Overview

• Name: recA
• Type: Machinery gene
• Locus tag: A6J38_RS07230
• Genome accession: NZ_CP020411
• Coordinates: 1466573..1467637 (+)
• Length: 354 a.a.
• NCBI ID: WP_005654959.1
• Uniprot ID: Q4QMV2
• Organism: Haemophilus influenzae strain FDAARGOS_199
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1461573..1472637

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
A6J38_RS07225 (A6J38_07220)	sxy/tfoX	1465600..1466253 (-)	654	WP_005694574.1	DNA transformation protein TfoX	Regulator
A6J38_RS07230 (A6J38_07225)	recA	1466573..1467637 (+)	1065	WP_005654959.1	recombinase RecA	Machinery gene
A6J38_RS07235 (A6J38_07230)	recX	1467717..1468175 (+)	459	WP_005694572.1	recombination regulator RecX	-
A6J38_RS07240 (A6J38_07235)	crcB	1468172..1468558 (-)	387	WP_005694571.1	fluoride efflux transporter CrcB	-
A6J38_RS07245 (A6J38_07240)	-	1468558..1469376 (-)	819	WP_005694570.1	Cof-type HAD-IIB family hydrolase	-
A6J38_RS07250 (A6J38_07245)	-	1469778..1470782 (+)	1005	WP_005651072.1	ornithine carbamoyltransferase	-
A6J38_RS07255 (A6J38_07250)	arcC	1470792..1471724 (+)	933	WP_005694569.1	carbamate kinase	-

Sequence

Protein

• Length: 354 a.a.
• Molecular weight: 38132.56 Da
• Isoelectric Point: 4.8875

>NTDB_id=222401 A6J38_RS07230 WP_005654959.1 1466573..1467637(+) (recA) [Haemophilus influenzae strain FDAARGOS_199]
MATQEEKQKALAAALGQIEKQFGKGSIMKLGDTKTLDVESISTGSLGLDVALGIGGLPMGRIVEIFGPESSGKTTLTLSV
IAQAQKAGKTCAFIDAEHALDPIYAAKLGVDVKELFVSQPDNGEQALEICDALVRSGAIDVIIVDSVAALTPKAEIEGDM
GDSHMGLQARLMSQALRKLTGQIKNANCLVVFINQIRMKIGVMFGNPETTTGGNALKFYSSVRLDIRRTGSVKDGENIIG
NETRVKVVKNKLAAPFRQVDFQILYGEGISKAGELLELGVKHKLVEKSGAWYSYNGEKIGQGKANSMKWLNENIEKSDEL
EARLRAELVANPEQALMADIEQSENNTESESDFE

Nucleotide

• Length: 1065 bp

>NTDB_id=222401 A6J38_RS07230 WP_005654959.1 1466573..1467637(+) (recA) [Haemophilus influenzae strain FDAARGOS_199]
ATGGCAACTCAAGAAGAAAAACAAAAAGCCCTAGCGGCTGCACTAGGGCAAATCGAAAAACAATTTGGTAAAGGCTCAAT
TATGAAATTAGGCGATACCAAAACGTTGGATGTAGAGTCTATTTCTACTGGATCACTTGGGTTAGATGTTGCGCTAGGGA
TTGGTGGTTTGCCTATGGGTCGAATTGTAGAAATTTTCGGGCCTGAATCATCGGGTAAAACAACATTAACTCTTTCCGTC
ATTGCTCAAGCGCAAAAAGCAGGAAAAACCTGTGCATTTATTGATGCAGAACACGCACTTGATCCTATTTATGCAGCAAA
ACTTGGTGTAGATGTAAAAGAACTTTTTGTTTCTCAACCAGATAATGGGGAACAGGCACTTGAAATCTGTGATGCATTAG
TTCGCTCAGGTGCAATTGATGTAATTATTGTGGACTCCGTTGCCGCACTGACACCAAAAGCTGAAATTGAAGGCGATATG
GGCGATTCTCATATGGGGCTGCAAGCACGTTTAATGTCTCAAGCTTTGCGTAAACTCACAGGTCAAATTAAAAATGCAAA
CTGTCTAGTTGTGTTTATTAACCAAATCCGTATGAAAATAGGCGTGATGTTTGGTAATCCTGAAACCACCACAGGCGGTA
ATGCATTAAAATTCTATTCTTCTGTTCGCTTAGATATTCGCCGTACAGGTTCTGTAAAAGACGGGGAAAATATTATTGGA
AATGAAACCCGCGTAAAAGTAGTGAAAAACAAATTAGCGGCACCGTTCCGCCAAGTGGATTTCCAAATTCTCTATGGAGA
AGGCATTTCAAAAGCAGGTGAATTATTAGAACTTGGTGTAAAACACAAACTTGTAGAAAAATCAGGCGCTTGGTATTCCT
ACAATGGTGAAAAAATTGGTCAAGGAAAGGCTAATTCAATGAAATGGCTTAACGAAAATATAGAGAAATCAGATGAATTA
GAAGCTCGTTTACGTGCTGAATTAGTGGCCAATCCAGAACAAGCCTTAATGGCGGATATTGAACAATCTGAAAATAATAC
TGAATCAGAAAGTGATTTTGAATAA

Domains

Predicted by InterproScan.

• recA bacterial DNA recombination protein (RecA) (9-270)

3D structure

• AlphaFold DB: Q4QMV2

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recA	Glaesserella parasuis strain SC1401	75.429	98.87	0.746
recA	Vibrio cholerae strain A1552	74.203	97.458	0.723
recA	Vibrio cholerae O1 biovar El Tor strain E7946	74.203	97.458	0.723
recA	Pseudomonas stutzeri DSM 10701	75.385	91.808	0.692
recA	Neisseria gonorrhoeae MS11	74.923	91.243	0.684
recA	Neisseria gonorrhoeae MS11	74.923	91.243	0.684
recA	Neisseria gonorrhoeae strain FA1090	74.923	91.243	0.684
recA	Acinetobacter baylyi ADP1	68.768	98.588	0.678
recA	Acinetobacter baumannii D1279779	70.769	91.808	0.65
recA	Ralstonia pseudosolanacearum GMI1000	70.846	90.113	0.638
recA	Riemerella anatipestifer ATCC 11845 = DSM 15868	62.5	94.915	0.593
recA	Helicobacter pylori 26695	60.588	96.045	0.582
recA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	64.669	89.548	0.579
recA	Helicobacter pylori strain NCTC11637	60	96.045	0.576
recA	Streptococcus pneumoniae R6	56.695	99.153	0.562
recA	Streptococcus pneumoniae Rx1	56.695	99.153	0.562
recA	Streptococcus pneumoniae D39	56.695	99.153	0.562
recA	Streptococcus pneumoniae TIGR4	56.695	99.153	0.562
recA	Bacillus subtilis subsp. subtilis str. 168	64.286	87.006	0.559
recA	Streptococcus mutans UA159	55.932	100	0.559
recA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	60.55	92.373	0.559
recA	Streptococcus mitis NCTC 12261	58.41	92.373	0.54
recA	Streptococcus mitis SK321	58.104	92.373	0.537
recA	Latilactobacillus sakei subsp. sakei 23K	58.514	91.243	0.534
recA	Streptococcus pyogenes NZ131	56.707	92.655	0.525
recA	Lactococcus lactis subsp. cremoris KW2	56	91.808	0.514