Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   C2H96_RS14770 Genome accession   NZ_CP026035
Coordinates   2898151..2898864 (+) Length   237 a.a.
NCBI ID   WP_003228163.1    Uniprot ID   -
Organism   Bacillus subtilis strain PK5_68     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 2893151..2903864
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  C2H96_RS14735 (C2H96_14665) yvcI 2893397..2893873 (+) 477 WP_010886622.1 8-oxo-dGTP diphosphatase -
  C2H96_RS14740 (C2H96_14670) rapZ 2893898..2894785 (+) 888 WP_003243903.1 RNase adapter RapZ -
  C2H96_RS14745 (C2H96_14675) mgfK 2894787..2895740 (+) 954 WP_003244450.1 gluconeogenesis morphogenetic factor -
  C2H96_RS14750 (C2H96_14680) whiA 2895763..2896713 (+) 951 WP_003228147.1 DNA-binding protein WhiA -
  C2H96_RS14755 (C2H96_14685) crh 2896737..2896994 (+) 258 WP_003219835.1 HPr family phosphocarrier protein -
  C2H96_RS14760 (C2H96_14690) yvcN 2896995..2897759 (+) 765 WP_086344361.1 arylamine N-acetyltransferase -
  C2H96_RS14765 (C2H96_14695) - 2897795..2898004 (-) 210 WP_029318346.1 hypothetical protein -
  C2H96_RS14770 (C2H96_14700) braR 2898151..2898864 (+) 714 WP_003228163.1 two-component system response regulator PsdR Regulator
  C2H96_RS14775 (C2H96_14705) psdS 2898858..2899928 (+) 1071 WP_249847960.1 two-component sensor histidine kinase PsdS -
  C2H96_RS14780 (C2H96_14710) psdA 2900011..2900790 (+) 780 WP_003228167.1 lantibiotic ABC transporter ATP-binding protein PsdA -
  C2H96_RS14785 (C2H96_14715) psdB 2900765..2902705 (+) 1941 WP_032726921.1 lantibiotic ABC transporter permease PsdB -
  C2H96_RS14790 (C2H96_14720) yvcT 2902742..2903719 (-) 978 WP_072173470.1 D-glycerate dehydrogenase -

Sequence

Protein


Download         Length: 237 a.a.        Molecular weight: 27541.46 Da        Isoelectric Point: 4.6774

>NTDB_id=222389 C2H96_RS14770 WP_003228163.1 2898151..2898864(+) (braR) [Bacillus subtilis strain PK5_68]
MYRILLVEDDERIASLLGGHLQKYGYEVKIAEQLNDIKLEFAEMKPDLVLLDINLPFFDGFYWCRQIRTISNAPIIFISA
RTDELNQVMAIENGGDDYITKPFHLEVVMAKIKSVLRRTYGEYSPSLPQESRIVELGGLTIYPDQNEAEWNSVRILFSQK
EFQLLSIFVREHKKIVSRDELLEALWDDVDFVDDNTLTVNVNRLRRKLENAGLKDCISTIRGQGYQFQVNRKDEAEC

Nucleotide


Download         Length: 714 bp        

>NTDB_id=222389 C2H96_RS14770 WP_003228163.1 2898151..2898864(+) (braR) [Bacillus subtilis strain PK5_68]
GTGTATCGGATTTTGCTTGTGGAAGATGATGAGCGGATTGCTTCTTTGCTGGGCGGTCATCTTCAAAAATACGGATATGA
AGTGAAAATTGCTGAACAGCTGAATGATATAAAATTGGAATTTGCAGAAATGAAGCCTGATCTTGTGCTGCTTGATATCA
ACCTGCCTTTTTTTGACGGGTTTTATTGGTGCAGGCAAATCCGTACCATTTCCAATGCGCCGATTATCTTTATATCGGCA
CGGACCGATGAGCTGAATCAGGTAATGGCGATTGAAAATGGCGGCGATGATTATATCACAAAGCCGTTCCATCTAGAGGT
AGTGATGGCCAAAATCAAAAGCGTCCTGCGCCGCACATATGGTGAATACTCGCCCTCTTTGCCGCAGGAATCAAGAATAG
TGGAGCTTGGCGGGCTAACGATTTATCCTGATCAAAATGAAGCGGAGTGGAACAGCGTCCGGATTTTGTTTTCCCAAAAA
GAATTCCAGCTTCTCTCGATTTTTGTGAGGGAGCATAAAAAAATTGTCTCTCGTGATGAACTATTGGAGGCGTTATGGGA
TGACGTTGATTTTGTCGATGACAATACGTTAACGGTCAATGTCAACCGGCTGCGGAGAAAACTGGAGAATGCAGGACTGA
AAGATTGCATTTCCACAATCAGAGGACAAGGCTATCAATTTCAAGTCAATCGGAAGGATGAAGCGGAGTGTTAA

Domains

Predicted by InterProScan.

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(155-227)

Response regulator receiver domain (Response_reg)

(4-112)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

45.536

94.515

0.43

Multiple sequence alignment