Detailed information NTG0222161

Bioinformatically predicted

Overview

• Name: rarA
• Type: Machinery gene
• Locus tag: C2H94_RS03115
• Genome accession: NZ_CP026034
• Coordinates: 526002..527267 (+)
• Length: 421 a.a.
• NCBI ID: WP_014480427.1
• Uniprot ID: -
• Organism: Bacillus subtilis strain PK5_52
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 521002..532267

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
C2H94_RS03095 (C2H94_03055)	yrrB	522373..522993 (-)	621	WP_166444025.1	tetratricopeptide repeat protein	-
C2H94_RS03100 (C2H94_03060)	mnmA	523079..524194 (-)	1116	WP_014480424.1	tRNA 2-thiouridine(34) synthase MnmA	-
C2H94_RS03105 (C2H94_03065)	iscSA	524225..525364 (-)	1140	WP_072175599.1	cysteine desulfurase family protein	-
C2H94_RS03110 (C2H94_03070)	cymR	525383..525799 (-)	417	WP_003225879.1	cysteine metabolism transcriptional regulator CymR	-
C2H94_RS03115 (C2H94_03075)	rarA	526002..527267 (+)	1266	WP_014480427.1	replication-associated recombination protein A	Machinery gene
C2H94_RS03120 (C2H94_03080)	tcdA	527307..528071 (-)	765	WP_014480428.1	tRNA threonylcarbamoyladenosine dehydratase	-
C2H94_RS03130 (C2H94_03090)	aspS	528406..530184 (-)	1779	WP_015714438.1	aspartate--tRNA ligase	-
C2H94_RS03135 (C2H94_03095)	hisS	530198..531472 (-)	1275	WP_038829644.1	histidine--tRNA ligase	-
C2H94_RS03140 (C2H94_03100)	yrzK	531854..532024 (-)	171	WP_004399157.1	YrzK family protein	-

Sequence

Protein

• Length: 421 a.a.
• Molecular weight: 46463.29 Da
• Isoelectric Point: 7.2043

>NTDB_id=222161 C2H94_RS03115 WP_014480427.1 526002..527267(+) (rarA) [Bacillus subtilis strain PK5_52]
MKPLAYRMRPTKIEDIIGQQHLVAEDKIIGRMVQAKHLSSMILYGPPGIGKTSIATAIAGSTSIAFRKLNAVINNKKDME
IVAQEAKMSGQVILILDEVHRLDKGKQDFLLPYLENGMIILIGATTANPYHAINPAIRSRTQIFELEPLTPDLIKQALER
ALHDEHRGLGTYSVSIDDQAMEHFAHGCGGDVRSALNALELAVLSTKESADGEIHITLETAEECLQKKSFSHDKDGDAHY
DVLSAFQKSIRGSDANAALHYLARLIEAGDLESIARRLLVIAYEDIGLASPQAGPRVLNAIQTAERVGFPEARIPLANAV
IELCLSPKSNSAILAIDEALADIRAGKIGDVPKHLKDAHYKGAQELGRGIDYKYPHNYDSGWVEQQYLPDSLKNKQYYKP
KQTGKFESALKQVYDKLMKRK

Nucleotide

• Length: 1266 bp

>NTDB_id=222161 C2H94_RS03115 WP_014480427.1 526002..527267(+) (rarA) [Bacillus subtilis strain PK5_52]
ATGAAGCCATTGGCATATCGGATGCGTCCGACAAAAATAGAGGATATTATCGGCCAGCAGCATCTGGTGGCTGAAGATAA
AATTATTGGCAGAATGGTCCAGGCAAAACATTTGTCATCCATGATTTTGTACGGGCCGCCCGGAATTGGAAAAACATCAA
TCGCAACAGCAATCGCCGGTTCAACAAGTATTGCTTTTCGAAAGCTGAATGCTGTCATTAACAATAAAAAAGATATGGAA
ATCGTAGCTCAGGAAGCCAAGATGTCCGGCCAAGTGATTTTGATTCTGGATGAAGTCCACAGACTGGATAAAGGAAAACA
GGATTTTCTATTACCCTATTTAGAAAACGGGATGATTATTTTGATCGGAGCAACGACGGCTAACCCGTATCATGCCATTA
ATCCGGCGATCAGAAGCCGGACCCAGATTTTTGAGCTTGAACCGTTAACACCTGATCTGATTAAACAGGCACTGGAACGC
GCGCTCCATGATGAGCATCGGGGCCTTGGCACCTATTCTGTATCCATTGATGATCAGGCGATGGAGCATTTTGCCCACGG
ATGCGGAGGAGATGTCCGCTCCGCTTTAAATGCGCTTGAGCTTGCCGTGTTGTCAACGAAGGAGTCAGCAGACGGTGAAA
TTCACATTACATTAGAAACCGCGGAAGAATGCTTGCAGAAAAAAAGCTTTTCTCACGATAAAGATGGTGACGCGCATTAT
GATGTACTGTCCGCTTTTCAAAAATCGATCCGCGGCTCTGATGCCAACGCTGCTCTTCACTATTTGGCTAGATTAATTGA
AGCCGGTGATCTGGAGAGCATCGCAAGACGATTGCTTGTTATCGCCTATGAAGATATCGGTTTAGCAAGCCCGCAAGCCG
GCCCTAGAGTGCTGAACGCTATTCAGACCGCTGAGCGAGTCGGGTTTCCTGAAGCGCGAATCCCGCTGGCCAACGCAGTT
ATTGAGCTTTGCCTCTCACCGAAATCAAACTCTGCCATTCTGGCAATCGATGAGGCCCTGGCAGATATCAGAGCCGGAAA
AATTGGTGATGTCCCGAAGCATTTAAAAGACGCGCATTATAAAGGAGCTCAGGAATTAGGAAGAGGAATCGACTATAAAT
ACCCGCACAATTACGACAGCGGTTGGGTCGAACAACAATACCTCCCTGATTCTCTGAAAAATAAGCAATACTATAAGCCG
AAACAGACAGGAAAATTCGAATCCGCCTTAAAGCAGGTGTATGATAAATTAATGAAAAGAAAATAA

Domains

Predicted by InterProScan.

• AAA C-terminal domain (AAA_assoc_2) (172-251)

• MgsA AAA+ ATPase C terminal (MgsA_C) (252-417)

• Holliday junction DNA helicase RuvB P-loop domain (RuvB_N) (8-125)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rarA	Bacillus subtilis subsp. subtilis str. 168	99.287	100	0.993