Detailed information    

insolico Bioinformatically predicted

Overview


Name   comP   Type   Regulator
Locus tag   BSK2_RS16020 Genome accession   NZ_CP020367
Coordinates   3104428..3106689 (-) Length   753 a.a.
NCBI ID   WP_080529736.1    Uniprot ID   -
Organism   Bacillus subtilis strain GQJK2     
Function   phosphorylation of ComA (predicted from homology)   
Competence regulation

Genomic Context


Location: 3099428..3111689
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BSK2_RS15980 (BSK2_15980) mrpB 3099895..3100326 (+) 432 WP_003228819.1 Na(+)/H(+) antiporter subunit B -
  BSK2_RS15985 (BSK2_15985) mrpC 3100326..3100667 (+) 342 WP_003220730.1 Na(+)/H(+) antiporter subunit C -
  BSK2_RS15990 (BSK2_15990) mrpD 3100660..3102141 (+) 1482 WP_080529734.1 Na+/H+ antiporter subunit D -
  BSK2_RS15995 (BSK2_15995) mrpE 3102147..3102623 (+) 477 WP_003228815.1 Na+/H+ antiporter subunit E -
  BSK2_RS16000 (BSK2_16000) mrpF 3102623..3102907 (+) 285 WP_003228814.1 Na(+)/H(+) antiporter subunit F1 -
  BSK2_RS16005 (BSK2_16005) mnhG 3102891..3103265 (+) 375 WP_003244302.1 monovalent cation/H(+) antiporter subunit G -
  BSK2_RS16010 (BSK2_16010) yuxO 3103304..3103684 (-) 381 WP_017695528.1 hotdog fold thioesterase -
  BSK2_RS16015 (BSK2_16015) comA 3103703..3104347 (-) 645 WP_080529735.1 two-component system response regulator ComA Regulator
  BSK2_RS16020 (BSK2_16020) comP 3104428..3106689 (-) 2262 WP_080529736.1 histidine kinase Regulator
  BSK2_RS16025 (BSK2_16025) comX 3106705..3106926 (-) 222 WP_014480704.1 competence pheromone ComX -
  BSK2_RS16030 (BSK2_16030) - 3106928..3107791 (-) 864 WP_080529737.1 polyprenyl synthetase family protein -
  BSK2_RS16035 (BSK2_16035) degQ 3107976..3108116 (-) 141 WP_003220708.1 degradation enzyme regulation protein DegQ Regulator
  BSK2_RS21155 - 3108338..3108463 (+) 126 WP_003228793.1 hypothetical protein -
  BSK2_RS16040 (BSK2_16040) - 3108578..3108946 (+) 369 WP_014477834.1 hypothetical protein -
  BSK2_RS16045 (BSK2_16045) pdeH 3108922..3110151 (-) 1230 WP_003243525.1 cyclic di-GMP phosphodiesterase -

Sequence


Protein


Download         Length: 753 a.a.        Molecular weight: 87834.60 Da        Isoelectric Point: 8.1649

>NTDB_id=221780 BSK2_RS16020 WP_080529736.1 3104428..3106689(-) (comP) [Bacillus subtilis strain GQJK2]
MYRYINVYKYLSLVFIILSFIYVIYLSYSFAFNIFVGADVKINEQGKLEVTNVLDYTDEYYSGVKKGDIILEVNGEKGSD
IQLKSGRLVNVESLIVERDNKSFHLQNVSLISEENLFMYLIPVISYSICLFCIFFIYRINKVRKSTSAYILILFLLFVSV
AYVSACGARRGEEISTYLLVLTLVSCPVLYIHFIYKYFIELGTKLFEKKILIIMYMLPLINLLLEDVLSNRLKSSAFLSN
LNLISFFVLVLTVSILIHKGIRKFKQKEQKSILKVLAYTNIFSFSPFIVFFAVPYVFFEKYVSPFSLAAFTLVIPFSLVY
QFMTNRLYNIDFVVGRLKYYGFLAITPTIIVVTIFNYIQQPKDIFYLVKLTIAIYVLMFAVFYFKEIIDFRFKLKRFTEK
FNYQDGIFKFTQLIKQASSVDQVLNHFKNTILEVLNIDNACVYDNSKGEITLLSKNNFKDLTYKNHEQYVKNFSGDIGKI
KEFKQGFIIKIGERGDRSFLVLCFSSYNTFKLTRDEIAWLQTLAFYTNVSLENVMKIEELMVHLEDLKQQESNPVWLKKL
MYTIEEKQRSDLARDLHDSVLQDLISLKRQCELFLGDFKKDDNPCREEVQDKLVQMNEQMSDVISMTRETCHELRPQQQE
RVPFHIRLNTGRFTASLDLDSQLNLYRIIQEFLSNAVKHSQATDVLIMLISIQNKIVLHYEDDGVGFDQEKNTEHSMSMG
LSGIKERVRALDGRLRIETSEGKGFKADIEIEL

Nucleotide


Download         Length: 2262 bp        

>NTDB_id=221780 BSK2_RS16020 WP_080529736.1 3104428..3106689(-) (comP) [Bacillus subtilis strain GQJK2]
ATGTACAGATATATTAACGTCTATAAATATTTGTCTCTAGTTTTTATCATTTTAAGTTTTATTTATGTTATATACCTCTC
GTATAGCTTTGCTTTTAACATCTTCGTAGGTGCGGATGTAAAGATAAATGAACAGGGTAAGTTAGAGGTCACCAATGTTT
TAGATTATACAGATGAATATTATTCAGGTGTGAAAAAGGGAGATATCATTCTTGAAGTAAATGGGGAGAAAGGCAGTGAT
ATTCAATTAAAAAGTGGAAGATTGGTCAATGTAGAAAGTTTAATTGTTGAGAGAGATAATAAATCATTTCATTTACAAAA
TGTAAGCCTAATCAGTGAAGAAAATTTATTTATGTATCTCATTCCTGTAATATCTTATTCAATCTGTTTATTTTGTATAT
TTTTTATTTATAGAATAAATAAAGTAAGAAAATCAACTTCTGCTTATATTTTAATTTTATTTTTGTTATTTGTATCAGTA
GCGTATGTAAGTGCATGTGGAGCAAGAAGAGGTGAAGAGATAAGCACTTATCTGCTTGTTCTTACTTTAGTCAGTTGTCC
GGTGTTATATATTCATTTTATATATAAATACTTTATAGAATTAGGAACAAAGTTATTCGAAAAGAAGATTTTAATCATTA
TGTATATGCTCCCGCTAATAAATCTTTTATTAGAGGACGTTCTGAGTAATAGATTAAAATCTTCGGCTTTTTTGTCTAAT
CTGAATTTGATTTCATTTTTTGTCCTAGTTCTTACTGTATCGATTCTTATCCATAAAGGGATAAGAAAATTTAAACAAAA
AGAGCAAAAGTCAATTTTGAAAGTCCTTGCTTATACAAATATCTTTTCTTTCAGTCCGTTTATTGTCTTTTTTGCTGTTC
CATATGTGTTTTTCGAGAAGTATGTCTCACCTTTTAGTTTGGCTGCTTTTACACTTGTTATACCTTTTTCTTTAGTATAT
CAATTTATGACTAATAGACTTTATAATATCGACTTTGTTGTGGGGCGGCTTAAGTACTACGGTTTTTTAGCCATTACACC
TACTATTATCGTAGTGACCATCTTTAATTACATTCAGCAACCAAAGGATATCTTTTATTTAGTTAAACTAACAATTGCAA
TATATGTTCTTATGTTTGCCGTTTTTTACTTTAAAGAAATCATTGATTTTCGTTTCAAGTTGAAAAGATTTACAGAGAAA
TTTAATTATCAAGATGGGATTTTTAAATTTACTCAGTTGATTAAGCAAGCATCATCAGTAGATCAAGTACTTAATCACTT
TAAAAATACAATCCTAGAAGTATTAAACATAGATAATGCTTGCGTGTATGATAATTCTAAAGGGGAAATCACCCTTCTTA
GTAAGAACAACTTTAAAGATCTGACTTATAAAAATCATGAGCAATATGTGAAAAATTTTTCTGGTGATATCGGTAAAATT
AAAGAGTTTAAACAAGGTTTTATTATTAAAATAGGTGAACGAGGAGACAGATCATTTTTAGTACTCTGTTTCTCAAGTTA
TAATACTTTTAAGTTAACAAGGGATGAAATTGCATGGCTTCAAACATTAGCATTTTATACAAATGTCTCATTGGAAAACG
TTATGAAAATCGAAGAATTGATGGTGCATCTTGAGGATTTAAAACAACAAGAATCCAACCCCGTATGGCTCAAAAAACTC
ATGTACACGATCGAGGAAAAACAACGCTCGGATCTCGCCCGCGATCTCCACGATTCGGTTCTTCAGGATTTGATTTCCTT
AAAACGCCAGTGTGAGCTGTTTTTGGGTGATTTCAAGAAGGATGATAATCCGTGCCGTGAAGAGGTGCAGGACAAGCTTG
TACAGATGAATGAGCAGATGTCTGATGTGATTTCGATGACGAGGGAGACGTGTCATGAGCTGCGGCCGCAGCAGCAGGAG
CGGGTTCCGTTTCATATTCGTTTAAATACCGGGAGATTTACGGCTTCCCTTGATCTGGATTCGCAGCTGAATTTGTACCG
GATCATTCAAGAGTTTCTGTCTAATGCGGTCAAGCACTCTCAGGCGACGGATGTGCTGATTATGCTCATCAGTATTCAAA
ACAAAATCGTTCTTCATTATGAGGATGATGGCGTAGGGTTTGATCAGGAAAAGAATACTGAGCATTCCATGAGCATGGGG
CTTTCTGGCATTAAGGAGAGAGTCAGGGCTTTAGATGGGCGCCTTCGGATTGAAACAAGTGAAGGAAAGGGCTTTAAGGC
TGATATTGAAATCGAATTGTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comP Bacillus subtilis subsp. subtilis str. 168

53.966

100

0.551


Multiple sequence alignment