Detailed information
Bioinformatically predicted
Overview
| Name | sinR | Type | Regulator |
| Locus tag | BSK2_RS12365 | Genome accession | NZ_CP020367 |
| Coordinates | 2429591..2429926 (+) | Length | 111 a.a. |
| NCBI ID | WP_003226345.1 | Uniprot ID | A0AAE2VGU9 |
| Organism | Bacillus subtilis strain GQJK2 | ||
| Function | repression of rok; repression of degU; repression of spo0A (predicted from homology) Competence regulation |
||
Genomic Context
Location: 2424591..2434926
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BSK2_RS12345 (BSK2_12345) | gcvT | 2425184..2426272 (-) | 1089 | WP_080529534.1 | glycine cleavage system aminomethyltransferase GcvT | - |
| BSK2_RS12350 (BSK2_12350) | hepAA | 2426713..2428386 (+) | 1674 | WP_080529535.1 | SNF2-related protein | - |
| BSK2_RS12355 (BSK2_12355) | yqhG | 2428407..2429201 (+) | 795 | WP_003230200.1 | YqhG family protein | - |
| BSK2_RS12360 (BSK2_12360) | sinI | 2429384..2429557 (+) | 174 | WP_003230187.1 | anti-repressor SinI | Regulator |
| BSK2_RS12365 (BSK2_12365) | sinR | 2429591..2429926 (+) | 336 | WP_003226345.1 | transcriptional regulator SinR | Regulator |
| BSK2_RS12370 (BSK2_12370) | tasA | 2430019..2430804 (-) | 786 | WP_003230183.1 | biofilm matrix protein TasA | - |
| BSK2_RS12375 (BSK2_12375) | sipW | 2430868..2431440 (-) | 573 | WP_003230181.1 | signal peptidase I SipW | - |
| BSK2_RS12380 (BSK2_12380) | tapA | 2431424..2432185 (-) | 762 | WP_029726724.1 | amyloid fiber anchoring/assembly protein TapA | - |
| BSK2_RS12385 (BSK2_12385) | yqzG | 2432457..2432783 (+) | 327 | WP_029317915.1 | YqzG/YhdC family protein | - |
| BSK2_RS12390 (BSK2_12390) | spoIITA | 2432825..2433004 (-) | 180 | WP_014480252.1 | YqzE family protein | - |
| BSK2_RS12395 (BSK2_12395) | comGG | 2433075..2433449 (-) | 375 | WP_014480253.1 | ComG operon protein ComGG | Machinery gene |
| BSK2_RS12400 (BSK2_12400) | comGF | 2433450..2433833 (-) | 384 | WP_080529536.1 | ComG operon protein ComGF | Machinery gene |
| BSK2_RS12405 (BSK2_12405) | comGE | 2433859..2434206 (-) | 348 | WP_080529537.1 | ComG operon protein 5 | Machinery gene |
| BSK2_RS12410 (BSK2_12410) | comGD | 2434190..2434621 (-) | 432 | WP_080529538.1 | comG operon protein ComGD | Machinery gene |
| BSK2_RS12415 (BSK2_12415) | comGC | 2434611..2434907 (-) | 297 | WP_003230162.1 | comG operon protein ComGC | Machinery gene |
Sequence
Protein
Download Length: 111 a.a. Molecular weight: 12988.64 Da Isoelectric Point: 7.2023
>NTDB_id=221758 BSK2_RS12365 WP_003226345.1 2429591..2429926(+) (sinR) [Bacillus subtilis strain GQJK2]
MIGQRIKQYRKEKGYSLSELAEKAGVAKSYLSSIERNLQTNPSIQFLEKVSAVLDVSVHTLLDEKHETEYDGQLDSEWEK
LVRDAMTSGVSKKQFREFLDYQKWRKSQKEE
MIGQRIKQYRKEKGYSLSELAEKAGVAKSYLSSIERNLQTNPSIQFLEKVSAVLDVSVHTLLDEKHETEYDGQLDSEWEK
LVRDAMTSGVSKKQFREFLDYQKWRKSQKEE
Nucleotide
Download Length: 336 bp
>NTDB_id=221758 BSK2_RS12365 WP_003226345.1 2429591..2429926(+) (sinR) [Bacillus subtilis strain GQJK2]
TTGATTGGCCAGCGTATTAAACAATACCGTAAAGAAAAAGGCTACTCACTATCAGAACTAGCTGAAAAAGCTGGGGTAGC
GAAGTCTTATTTAAGCTCAATAGAACGAAATCTACAAACGAACCCCTCCATTCAATTTCTCGAAAAAGTCTCCGCTGTTC
TGGACGTCTCGGTTCATACTTTGCTCGATGAGAAACATGAAACCGAATACGATGGTCAATTAGATAGTGAATGGGAGAAA
TTGGTTCGCGATGCGATGACATCCGGGGTATCGAAAAAACAATTTCGTGAATTTTTAGATTATCAAAAATGGAGAAAATC
CCAAAAAGAGGAGTAG
TTGATTGGCCAGCGTATTAAACAATACCGTAAAGAAAAAGGCTACTCACTATCAGAACTAGCTGAAAAAGCTGGGGTAGC
GAAGTCTTATTTAAGCTCAATAGAACGAAATCTACAAACGAACCCCTCCATTCAATTTCTCGAAAAAGTCTCCGCTGTTC
TGGACGTCTCGGTTCATACTTTGCTCGATGAGAAACATGAAACCGAATACGATGGTCAATTAGATAGTGAATGGGAGAAA
TTGGTTCGCGATGCGATGACATCCGGGGTATCGAAAAAACAATTTCGTGAATTTTTAGATTATCAAAAATGGAGAAAATC
CCAAAAAGAGGAGTAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| sinR | Bacillus subtilis subsp. subtilis str. 168 |
100 |
100 |
1 |