Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   B4U62_RS02200 Genome accession   NZ_CP020102
Coordinates   432413..433363 (+) Length   316 a.a.
NCBI ID   WP_003234491.1    Uniprot ID   A0AAE2SHG3
Organism   Bacillus subtilis strain NCIB 3610     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 427413..438363
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  B4U62_RS02175 (B4U62_02175) rapC 428872..430020 (+) 1149 WP_003246686.1 response regulator aspartate phosphatase RapC Regulator
  B4U62_RS02180 (B4U62_02180) phrC 430004..430126 (+) 123 WP_003224994.1 phosphatase RapC inhibitor PhrC Regulator
  B4U62_RS02185 (B4U62_02185) yczM 430226..430315 (-) 90 WP_015482794.1 YjcZ family sporulation protein -
  B4U62_RS02190 (B4U62_02190) yczN 430397..430510 (-) 114 WP_003234495.1 YjcZ family sporulation protein -
  B4U62_RS02195 (B4U62_02195) thrD 430664..432028 (-) 1365 WP_003234493.1 aspartate kinase -
  B4U62_RS02200 (B4U62_02200) ceuB 432413..433363 (+) 951 WP_003234491.1 petrobactin ABC transporter permease YclN Machinery gene
  B4U62_RS02205 (B4U62_02205) yclO 433356..434303 (+) 948 WP_003246705.1 petrobactin ABC transporter permease YclO -
  B4U62_RS02210 (B4U62_02210) yclP 434297..435055 (+) 759 WP_003234487.1 petrobactin ABC transporter ATP-binding protein YclP -
  B4U62_RS02215 (B4U62_02215) yclQ 435077..436030 (+) 954 WP_003246619.1 petrobactin ABC transporter substrate-binding protein YclQ -
  B4U62_RS02220 (B4U62_02220) cdaE 436077..437495 (-) 1419 WP_003246604.1 MDR family MFS transporter -

Sequence

Protein


Download         Length: 316 a.a.        Molecular weight: 34899.33 Da        Isoelectric Point: 9.9364

>NTDB_id=221134 B4U62_RS02200 WP_003234491.1 432413..433363(+) (ceuB) [Bacillus subtilis strain NCIB 3610]
MKLRYLFILLIILAVTSVFIGVEDLSPLDLFDLSKQEASTLFASRLPRLISIVIAGLSMSICGLIMQQISRNKFVSPTTA
GTMDWARLGILISLLLFTSASPLIKMLVAFVFALAGNFLFMKILERIKFNDTIFIPLVGLMLGNIVSSIATFIAYKYDLI
QNVSSWLQGDFSLVVKGRYELLYLSIPLVIIAYVYADKFTLAGMGESFSVNLGLKYKRVVNIGLIIVSLITSLVILTVGM
LPFLGLIIPNIVSIYRGDNLKSSLPHTVLLGAVFVLFCDILGRIIIFPYEISIGLMVGIIGSGIFLFMLLRRKAYA

Nucleotide


Download         Length: 951 bp        

>NTDB_id=221134 B4U62_RS02200 WP_003234491.1 432413..433363(+) (ceuB) [Bacillus subtilis strain NCIB 3610]
ATGAAGCTACGTTACTTATTTATTCTACTTATCATATTAGCAGTCACATCTGTATTTATCGGTGTAGAAGATCTGTCGCC
GCTTGATCTCTTCGATTTAAGCAAACAAGAGGCGTCAACGCTGTTTGCAAGCCGTTTGCCGCGATTGATCAGCATTGTCA
TTGCGGGATTAAGCATGAGCATCTGCGGTTTGATTATGCAGCAGATCAGCAGAAATAAATTCGTGTCACCGACGACGGCG
GGCACGATGGATTGGGCGAGGCTCGGCATTTTAATTTCCTTGCTGCTGTTTACATCCGCCAGTCCTTTAATCAAAATGCT
GGTCGCGTTTGTCTTTGCCCTTGCAGGAAATTTTCTGTTTATGAAAATCCTTGAAAGAATCAAGTTTAACGACACCATCT
TTATTCCGCTTGTCGGTTTAATGCTCGGGAATATCGTCAGTTCAATCGCGACATTTATCGCATATAAATATGACTTGATC
CAGAATGTGTCATCATGGCTGCAGGGAGACTTCTCTTTAGTCGTGAAAGGAAGATACGAGCTTCTTTATCTGAGTATTCC
GCTCGTCATCATTGCCTATGTGTATGCGGATAAATTCACATTGGCCGGTATGGGTGAAAGCTTTTCTGTCAACCTCGGCC
TCAAGTATAAACGGGTTGTGAACATCGGGCTCATTATCGTGTCCCTGATCACGTCTCTTGTCATTTTGACTGTCGGTATG
CTGCCGTTTCTCGGTTTAATCATCCCGAATATTGTATCGATTTACAGAGGAGACAATCTGAAGAGCAGCCTGCCGCATAC
TGTGCTGTTGGGAGCGGTTTTTGTGCTGTTTTGCGATATACTGGGCAGAATCATTATCTTCCCTTATGAAATCTCGATTG
GCCTGATGGTCGGAATCATCGGCAGCGGCATTTTCCTGTTTATGCTGTTAAGGAGAAAAGCCTATGCGTAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(9-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

52.215

100

0.522

Multiple sequence alignment