Detailed information NTG0221132

Bioinformatically predicted

Overview

• Name: rapC
• Type: Regulator
• Locus tag: B4U62_RS02175
• Genome accession: NZ_CP020102
• Coordinates: 428872..430020 (+)
• Length: 382 a.a.
• NCBI ID: WP_003246686.1
• Uniprot ID: A0AAE2V9H5
• Organism: Bacillus subtilis strain NCIB 3610
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 423872..435020

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
B4U62_RS02155 (B4U62_02155)	yclH	424249..424929 (-)	681	WP_003234507.1	ABC transporter ATP-binding protein	-
B4U62_RS02160 (B4U62_02160)	yclI	424945..426405 (-)	1461	WP_003234506.1	ABC transporter permease	-
B4U62_RS02165 (B4U62_02165)	yclJ	426618..427301 (+)	684	WP_003246532.1	two-component system response regulator YclJ	-
B4U62_RS02170 (B4U62_02170)	yclK	427288..428709 (+)	1422	WP_009969263.1	two-component system sensor histidine kinase YclK	-
B4U62_RS02175 (B4U62_02175)	rapC	428872..430020 (+)	1149	WP_003246686.1	response regulator aspartate phosphatase RapC	Regulator
B4U62_RS02180 (B4U62_02180)	phrC	430004..430126 (+)	123	WP_003224994.1	phosphatase RapC inhibitor PhrC	Regulator
B4U62_RS02185 (B4U62_02185)	yczM	430226..430315 (-)	90	WP_015482794.1	YjcZ family sporulation protein	-
B4U62_RS02190 (B4U62_02190)	yczN	430397..430510 (-)	114	WP_003234495.1	YjcZ family sporulation protein	-
B4U62_RS02195 (B4U62_02195)	thrD	430664..432028 (-)	1365	WP_003234493.1	aspartate kinase	-
B4U62_RS02200 (B4U62_02200)	ceuB	432413..433363 (+)	951	WP_003234491.1	petrobactin ABC transporter permease YclN	Machinery gene
B4U62_RS02205 (B4U62_02205)	yclO	433356..434303 (+)	948	WP_003246705.1	petrobactin ABC transporter permease YclO	-

Sequence

Protein

• Length: 382 a.a.
• Molecular weight: 45634.68 Da
• Isoelectric Point: 4.9618

>NTDB_id=221132 B4U62_RS02175 WP_003246686.1 428872..430020(+) (rapC) [Bacillus subtilis strain NCIB 3610]
MKSGVIPSSAVGQKINEWYRYIRTFSVPDAEVLKAEIQQELKHMQHDSNLLLYYSLMEFRHQLMLDYLEPLEKLNIEDQP
SLSELSRNIDSNQADLKGLLDYYVNFFRGMYEFDKREFISAITYYKQAEKKLSFVADHIERAEFYFKIAEAYYYMKQTYF
SLINIKNAYEIYVEQETYNVRIIQCHFVFGVNLMDERNFEQAARHFKLALNMAQAEQKAQLVGRAYYNLGLCYYNQDLLD
PAIDYFEKAVSTFESSRIVNSLPQAYFLITLIYYKQGKHDKASEYHKRGYEYAKETDDADYAVKFEFLQSLYLDQPNEEG
IERCFQYLKNKNMYADIEDLALEVAKYYYEQKWFKLSASYFLQVEEARKQIQRSEGLYEIEI

Nucleotide

• Length: 1149 bp

>NTDB_id=221132 B4U62_RS02175 WP_003246686.1 428872..430020(+) (rapC) [Bacillus subtilis strain NCIB 3610]
ATGAAGAGTGGGGTAATTCCTTCTTCAGCGGTCGGTCAAAAAATTAACGAGTGGTACAGATATATCCGGACATTCAGCGT
GCCGGATGCCGAAGTGTTAAAAGCTGAAATCCAGCAGGAACTGAAACACATGCAGCATGATTCCAACTTGCTGCTTTATT
ATTCACTAATGGAATTCCGGCACCAGCTTATGCTGGATTATCTTGAGCCGTTAGAGAAATTAAATATCGAAGACCAGCCA
AGCCTGTCTGAATTATCAAGAAACATTGACAGCAACCAGGCAGATCTCAAAGGGCTGCTCGACTATTACGTGAATTTTTT
TCGCGGGATGTATGAATTTGATAAGCGGGAATTTATTTCTGCCATTACATACTATAAACAGGCGGAGAAAAAGCTCTCCT
TTGTCGCAGACCATATTGAACGGGCTGAATTCTATTTTAAAATCGCGGAAGCTTATTATTATATGAAGCAAACGTATTTT
TCATTGATTAATATAAAAAACGCCTATGAAATTTACGTGGAGCAGGAAACCTATAATGTGAGAATCATTCAGTGCCATTT
CGTCTTCGGGGTCAACCTGATGGATGAAAGAAATTTCGAACAAGCCGCACGCCATTTCAAATTGGCGCTCAACATGGCCC
AAGCAGAACAAAAAGCCCAGCTGGTTGGAAGAGCATACTACAATCTCGGGTTATGCTATTACAATCAAGACCTTCTAGAC
CCTGCCATTGATTACTTTGAAAAAGCGGTCTCCACATTTGAAAGCAGCAGGATCGTCAATTCTCTCCCGCAAGCCTATTT
TTTAATCACCCTGATTTATTATAAACAGGGAAAACATGATAAAGCTTCGGAATATCACAAGCGGGGCTATGAATATGCTA
AAGAAACAGACGATGCAGACTATGCCGTAAAATTCGAGTTTTTGCAATCCCTATATCTGGATCAGCCCAATGAAGAAGGA
ATCGAACGATGTTTCCAGTACTTAAAAAATAAAAATATGTACGCTGATATAGAGGATTTAGCCCTAGAAGTAGCAAAATA
TTACTATGAACAGAAATGGTTTAAACTGTCTGCTTCCTACTTTCTACAAGTTGAAGAGGCAAGAAAACAAATACAAAGGA
GTGAAGGTTTGTATGAAATTGAAATCTAA

Domains

Predicted by InterproScan.

• Tetratricopeptide repeat (TPR_12) (223-294)

• response regulator aspartate phosphatase H, N terminal (RapH_N) (5-66)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapC	Bacillus subtilis subsp. subtilis str. 168	100	100	1
rapF	Bacillus subtilis subsp. subtilis str. 168	57.368	99.476	0.571