Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   OTEC02_RS03350 Genome accession   NZ_CP020015
Coordinates   681996..682379 (+) Length   127 a.a.
NCBI ID   WP_042897425.1    Uniprot ID   A0A446ZGB5
Organism   Acinetobacter lactucae strain OTEC-02     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 676996..687379
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OTEC02_RS03340 (OTEC02_03340) - 679896..681005 (-) 1110 WP_081175811.1 efflux RND transporter periplasmic adaptor subunit -
  OTEC02_RS03345 (OTEC02_03345) - 681074..681712 (-) 639 WP_213033142.1 hypothetical protein -
  OTEC02_RS03350 (OTEC02_03350) pilG 681996..682379 (+) 384 WP_042897425.1 twitching motility response regulator PilG Regulator
  OTEC02_RS03355 (OTEC02_03355) - 682403..682765 (+) 363 WP_002116220.1 PleD family two-component system response regulator -
  OTEC02_RS03360 (OTEC02_03360) - 682826..683362 (+) 537 WP_002116439.1 chemotaxis protein CheW -
  OTEC02_RS03365 (OTEC02_03365) - 683405..685483 (+) 2079 WP_081172814.1 methyl-accepting chemotaxis protein -

Sequence

Protein


Download         Length: 127 a.a.        Molecular weight: 14214.26 Da        Isoelectric Point: 4.5762

>NTDB_id=220087 OTEC02_RS03350 WP_042897425.1 681996..682379(+) (pilG) [Acinetobacter lactucae strain OTEC-02]
MEDAFQNLKVMVIDDSKTIRRTAETLLQREGCEVITAVDGFEALSKIAEANPDIIFVDIMMPRLDGYQTCALIKNSQNYQ
NIPVIMLSSKDGLFDQAKGRVVGSDEYLTKPFSKDELLNAIRNHVSS

Nucleotide


Download         Length: 384 bp        

>NTDB_id=220087 OTEC02_RS03350 WP_042897425.1 681996..682379(+) (pilG) [Acinetobacter lactucae strain OTEC-02]
ATGGAAGATGCATTCCAAAATCTGAAAGTAATGGTGATTGATGACTCAAAAACCATTCGCCGTACAGCAGAAACCTTATT
ACAGCGCGAAGGCTGTGAAGTCATTACTGCTGTGGATGGATTTGAAGCTTTGTCCAAAATTGCAGAAGCAAATCCGGATA
TTATTTTTGTCGATATCATGATGCCTCGTTTAGATGGTTATCAAACTTGTGCTTTGATAAAAAACTCTCAAAATTATCAG
AACATTCCCGTTATCATGCTCTCTAGTAAAGATGGTTTATTTGATCAGGCAAAAGGGCGTGTGGTAGGTTCAGATGAATA
CTTGACGAAACCTTTTAGCAAAGATGAATTGTTAAACGCGATTCGTAATCATGTAAGTTCATAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-122)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A446ZGB5

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

99.213

100

0.992
  vicR Streptococcus mutans UA159

43.59

92.126

0.402
  pilH Synechocystis sp. PCC 6803

40.708

88.976

0.362

Multiple sequence alignment