Detailed information
Bioinformatically predicted
Overview
| Name | pilY2 | Type | Machinery gene |
| Locus tag | OTEC02_RS01660 | Genome accession | NZ_CP020015 |
| Coordinates | 347931..348413 (+) | Length | 160 a.a. |
| NCBI ID | WP_062850207.1 | Uniprot ID | - |
| Organism | Acinetobacter lactucae strain OTEC-02 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 342931..353413
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| OTEC02_RS01650 (OTEC02_01650) | pilX | 343245..344054 (+) | 810 | WP_081172672.1 | PilX N-terminal domain-containing pilus assembly protein | Machinery gene |
| OTEC02_RS01655 (OTEC02_01655) | pilY1 | 344066..347920 (+) | 3855 | WP_213033135.1 | PilC/PilY family type IV pilus protein | Machinery gene |
| OTEC02_RS01660 (OTEC02_01660) | pilY2 | 347931..348413 (+) | 483 | WP_062850207.1 | type IV pilin protein | Machinery gene |
| OTEC02_RS01665 (OTEC02_01665) | pilE | 348410..348835 (+) | 426 | WP_062850206.1 | type IV pilin protein | Machinery gene |
| OTEC02_RS01670 (OTEC02_01670) | rpsP | 348983..349234 (+) | 252 | WP_000260334.1 | 30S ribosomal protein S16 | - |
| OTEC02_RS01675 (OTEC02_01675) | rimM | 349254..349802 (+) | 549 | WP_002116736.1 | ribosome maturation factor RimM | - |
| OTEC02_RS01680 (OTEC02_01680) | trmD | 349845..350600 (+) | 756 | WP_057105812.1 | tRNA (guanosine(37)-N1)-methyltransferase TrmD | - |
| OTEC02_RS01685 (OTEC02_01685) | rplS | 350820..351188 (+) | 369 | WP_002116654.1 | 50S ribosomal protein L19 | - |
| OTEC02_RS01690 (OTEC02_01690) | - | 351240..352181 (-) | 942 | WP_081175773.1 | triacylglycerol lipase | - |
| OTEC02_RS01695 (OTEC02_01695) | - | 352297..353328 (-) | 1032 | WP_081172673.1 | lipase secretion chaperone | - |
Sequence
Protein
Download Length: 160 a.a. Molecular weight: 17556.88 Da Isoelectric Point: 8.8104
>NTDB_id=220082 OTEC02_RS01660 WP_062850207.1 347931..348413(+) (pilY2) [Acinetobacter lactucae strain OTEC-02]
MNKYYILRFNQGVTLIELMVVIVIVAIFASIAIPSYQSYSRRATASAAKGEILKLAEQLERHKSKNFTYRGFTTTSVTLP
RGGYTIEISDDTRTGNLLTNAAANGQTWVIKATTTDSRNINFIAKNSGLRCQSLTATAVDNDCGGTVTCNVCETNSENWQ
MNKYYILRFNQGVTLIELMVVIVIVAIFASIAIPSYQSYSRRATASAAKGEILKLAEQLERHKSKNFTYRGFTTTSVTLP
RGGYTIEISDDTRTGNLLTNAAANGQTWVIKATTTDSRNINFIAKNSGLRCQSLTATAVDNDCGGTVTCNVCETNSENWQ
Nucleotide
Download Length: 483 bp
>NTDB_id=220082 OTEC02_RS01660 WP_062850207.1 347931..348413(+) (pilY2) [Acinetobacter lactucae strain OTEC-02]
ATGAATAAATATTATATTCTGCGGTTTAATCAGGGTGTTACCTTGATTGAACTCATGGTTGTCATCGTGATTGTCGCTAT
TTTTGCTTCAATTGCTATCCCTTCATATCAAAGTTATAGCCGCAGAGCGACTGCCTCTGCTGCTAAAGGTGAAATTCTAA
AATTGGCAGAACAGTTGGAACGACATAAATCCAAGAACTTTACTTATAGAGGATTTACGACCACATCTGTAACTTTGCCA
CGGGGTGGTTATACGATTGAAATTAGTGATGATACGAGGACAGGAAATTTATTAACGAATGCTGCTGCAAATGGGCAAAC
ATGGGTCATTAAAGCGACAACTACAGATTCAAGAAACATTAATTTTATTGCTAAGAATTCAGGTTTGCGTTGCCAAAGTT
TAACAGCTACGGCTGTTGATAATGACTGTGGTGGAACAGTCACTTGCAATGTATGTGAAACAAATAGTGAGAATTGGCAA
TGA
ATGAATAAATATTATATTCTGCGGTTTAATCAGGGTGTTACCTTGATTGAACTCATGGTTGTCATCGTGATTGTCGCTAT
TTTTGCTTCAATTGCTATCCCTTCATATCAAAGTTATAGCCGCAGAGCGACTGCCTCTGCTGCTAAAGGTGAAATTCTAA
AATTGGCAGAACAGTTGGAACGACATAAATCCAAGAACTTTACTTATAGAGGATTTACGACCACATCTGTAACTTTGCCA
CGGGGTGGTTATACGATTGAAATTAGTGATGATACGAGGACAGGAAATTTATTAACGAATGCTGCTGCAAATGGGCAAAC
ATGGGTCATTAAAGCGACAACTACAGATTCAAGAAACATTAATTTTATTGCTAAGAATTCAGGTTTGCGTTGCCAAAGTT
TAACAGCTACGGCTGTTGATAATGACTGTGGTGGAACAGTCACTTGCAATGTATGTGAAACAAATAGTGAGAATTGGCAA
TGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilY2 | Acinetobacter baumannii D1279779 |
93.75 |
100 |
0.938 |
| comE | Acinetobacter baylyi ADP1 |
40.698 |
100 |
0.438 |