Detailed information
Bioinformatically predicted
Overview
| Name | comO | Type | Machinery gene |
| Locus tag | BV134_RS05150 | Genome accession | NZ_CP020011 |
| Coordinates | 1020182..1020898 (+) | Length | 238 a.a. |
| NCBI ID | WP_014551003.1 | Uniprot ID | - |
| Organism | Haemophilus influenzae strain 67P56H1 | ||
| Function | type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1015182..1025898
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BV134_RS05130 (BV134_1039) | - | 1016120..1016650 (-) | 531 | WP_014551007.1 | DsbE family thiol:disulfide interchange protein | - |
| BV134_RS05135 (BV134_1040) | nrfE | 1016650..1018557 (-) | 1908 | WP_014551006.1 | heme lyase NrfEFG subunit NrfE | - |
| BV134_RS05140 (BV134_1041) | suhB | 1018667..1019470 (-) | 804 | WP_014551005.1 | inositol-1-monophosphatase | - |
| BV134_RS05145 (BV134_1042) | comN | 1019670..1020182 (+) | 513 | WP_050822924.1 | type II secretion system protein | Machinery gene |
| BV134_RS05150 (BV134_1043) | comO | 1020182..1020898 (+) | 717 | WP_014551003.1 | type II secretion system protein J | Machinery gene |
| BV134_RS05155 (BV134_1044) | comP | 1020913..1021596 (+) | 684 | WP_005659188.1 | DUF2572 family protein | Machinery gene |
| BV134_RS05160 (BV134_1045) | comQ | 1021589..1021876 (+) | 288 | WP_005655928.1 | DUF5374 domain-containing protein | Machinery gene |
| BV134_RS05165 (BV134_1046) | recC | 1021922..1025287 (+) | 3366 | WP_050822923.1 | exodeoxyribonuclease V subunit gamma | - |
| BV134_RS05170 (BV134_1047) | nrdR | 1025342..1025791 (+) | 450 | WP_005651549.1 | transcriptional regulator NrdR | - |
Sequence
Protein
Download Length: 238 a.a. Molecular weight: 26766.10 Da Isoelectric Point: 9.5507
>NTDB_id=219952 BV134_RS05150 WP_014551003.1 1020182..1020898(+) (comO) [Haemophilus influenzae strain 67P56H1]
MMKTLLKGQTLLALMISLTLSSLLLLSISHFYVQIQTQNQQMLLHLKLQAELQRTLQLIGKDLRRLGFRALNAKLTESNL
SLFELDEQGTAIFISQEDNAPPNSCVLFFYDLNKNGCIGKGSPKTCMKKGKNTSKSSTEELFGYKVSNKMIKTKLTYQSV
IPTNCTAETCKRAFQQTACNAGGGWADLLDNNEYEITRLQFNWLIEGKGLEIKLKGNLKQTPNISYETSLVVALWNQK
MMKTLLKGQTLLALMISLTLSSLLLLSISHFYVQIQTQNQQMLLHLKLQAELQRTLQLIGKDLRRLGFRALNAKLTESNL
SLFELDEQGTAIFISQEDNAPPNSCVLFFYDLNKNGCIGKGSPKTCMKKGKNTSKSSTEELFGYKVSNKMIKTKLTYQSV
IPTNCTAETCKRAFQQTACNAGGGWADLLDNNEYEITRLQFNWLIEGKGLEIKLKGNLKQTPNISYETSLVVALWNQK
Nucleotide
Download Length: 717 bp
>NTDB_id=219952 BV134_RS05150 WP_014551003.1 1020182..1020898(+) (comO) [Haemophilus influenzae strain 67P56H1]
ATGATGAAAACATTATTAAAAGGGCAAACCCTATTAGCACTGATGATTTCACTGACTTTGTCTTCTTTATTGCTGCTAAG
CATTTCGCATTTTTATGTGCAAATACAAACACAAAACCAACAAATGTTATTACATTTAAAATTACAAGCTGAATTACAAC
GAACATTACAGTTAATAGGTAAAGATCTTCGCCGATTAGGATTTCGAGCATTAAATGCAAAACTGACGGAAAGCAATTTA
TCTTTATTTGAATTAGATGAACAAGGCACAGCCATTTTTATTAGCCAAGAAGATAATGCACCACCTAATAGCTGCGTGTT
GTTCTTTTATGATTTAAATAAAAATGGCTGTATTGGTAAAGGTTCGCCGAAAACCTGTATGAAAAAAGGTAAAAATACAT
CTAAAAGTAGTACTGAAGAATTATTCGGCTATAAAGTGAGTAACAAAATGATAAAAACCAAACTGACTTATCAAAGTGTT
ATTCCTACTAATTGCACGGCAGAAACTTGTAAACGTGCTTTTCAACAAACCGCTTGTAACGCTGGTGGTGGATGGGCAGA
TTTATTAGATAACAACGAATATGAAATCACTAGGTTACAATTTAATTGGTTAATTGAAGGCAAAGGATTAGAAATCAAGC
TAAAAGGAAATTTAAAACAAACCCCAAATATCAGTTATGAAACATCCCTTGTTGTTGCACTATGGAATCAAAAATAA
ATGATGAAAACATTATTAAAAGGGCAAACCCTATTAGCACTGATGATTTCACTGACTTTGTCTTCTTTATTGCTGCTAAG
CATTTCGCATTTTTATGTGCAAATACAAACACAAAACCAACAAATGTTATTACATTTAAAATTACAAGCTGAATTACAAC
GAACATTACAGTTAATAGGTAAAGATCTTCGCCGATTAGGATTTCGAGCATTAAATGCAAAACTGACGGAAAGCAATTTA
TCTTTATTTGAATTAGATGAACAAGGCACAGCCATTTTTATTAGCCAAGAAGATAATGCACCACCTAATAGCTGCGTGTT
GTTCTTTTATGATTTAAATAAAAATGGCTGTATTGGTAAAGGTTCGCCGAAAACCTGTATGAAAAAAGGTAAAAATACAT
CTAAAAGTAGTACTGAAGAATTATTCGGCTATAAAGTGAGTAACAAAATGATAAAAACCAAACTGACTTATCAAAGTGTT
ATTCCTACTAATTGCACGGCAGAAACTTGTAAACGTGCTTTTCAACAAACCGCTTGTAACGCTGGTGGTGGATGGGCAGA
TTTATTAGATAACAACGAATATGAAATCACTAGGTTACAATTTAATTGGTTAATTGAAGGCAAAGGATTAGAAATCAAGC
TAAAAGGAAATTTAAAACAAACCCCAAATATCAGTTATGAAACATCCCTTGTTGTTGCACTATGGAATCAAAAATAA
Domains
No domain identified.
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comO | Haemophilus influenzae Rd KW20 |
98.319 |
100 |
0.983 |