Detailed information    

insolico Bioinformatically predicted

Overview

Name   comP   Type   Machinery gene
Locus tag   BV134_RS05155 Genome accession   NZ_CP020011
Coordinates   1020913..1021596 (+) Length   227 a.a.
NCBI ID   WP_005659188.1    Uniprot ID   A0A0D0ILL6
Organism   Haemophilus influenzae strain 67P56H1     
Function   type IV pilus biogenesis and function (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1015913..1026596
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BV134_RS05130 (BV134_1039) - 1016120..1016650 (-) 531 WP_014551007.1 DsbE family thiol:disulfide interchange protein -
  BV134_RS05135 (BV134_1040) nrfE 1016650..1018557 (-) 1908 WP_014551006.1 heme lyase NrfEFG subunit NrfE -
  BV134_RS05140 (BV134_1041) suhB 1018667..1019470 (-) 804 WP_014551005.1 inositol-1-monophosphatase -
  BV134_RS05145 (BV134_1042) comN 1019670..1020182 (+) 513 WP_050822924.1 type II secretion system protein Machinery gene
  BV134_RS05150 (BV134_1043) comO 1020182..1020898 (+) 717 WP_014551003.1 type II secretion system protein J Machinery gene
  BV134_RS05155 (BV134_1044) comP 1020913..1021596 (+) 684 WP_005659188.1 DUF2572 family protein Machinery gene
  BV134_RS05160 (BV134_1045) comQ 1021589..1021876 (+) 288 WP_005655928.1 DUF5374 domain-containing protein Machinery gene
  BV134_RS05165 (BV134_1046) recC 1021922..1025287 (+) 3366 WP_050822923.1 exodeoxyribonuclease V subunit gamma -
  BV134_RS05170 (BV134_1047) nrdR 1025342..1025791 (+) 450 WP_005651549.1 transcriptional regulator NrdR -

Sequence

Protein


Download         Length: 227 a.a.        Molecular weight: 25496.28 Da        Isoelectric Point: 8.4375

>NTDB_id=219953 BV134_RS05155 WP_005659188.1 1020913..1021596(+) (comP) [Haemophilus influenzae strain 67P56H1]
MTTQKGIITLTILIFISGLLTAFLLLDDNHLSFFRAQQNQRKHYVERTLQLQKMTEEKKQTACLDLPLNNDESVKQISIA
LEGAADAIQYFLWCERMSLFKKSPKKGDNQGALKDFVTGEKLAYFRPHFSSPPRILNANKMPKLYWFSDSQAEVEINGTV
SAILIAEGDLKLTGKGRISGAVITSGNLTLDGVTLAYGKKTVVALVQQYSQWQLAEKSWSDFNVQDE

Nucleotide


Download         Length: 684 bp        

>NTDB_id=219953 BV134_RS05155 WP_005659188.1 1020913..1021596(+) (comP) [Haemophilus influenzae strain 67P56H1]
ATGACAACACAAAAAGGCATTATCACGCTGACTATTCTGATTTTTATTTCAGGTTTATTAACTGCGTTTTTATTGTTGGA
TGACAACCATTTAAGTTTTTTTCGGGCGCAACAAAATCAACGAAAACACTATGTGGAAAGAACATTACAACTGCAAAAAA
TGACAGAGGAGAAAAAACAAACTGCCTGCCTTGATTTACCCTTAAATAATGATGAAAGTGTGAAGCAAATCAGCATCGCC
CTTGAGGGTGCCGCCGATGCAATTCAATATTTTCTTTGGTGTGAAAGAATGAGTCTATTTAAAAAATCGCCTAAAAAGGG
AGATAATCAAGGTGCATTGAAAGATTTTGTGACTGGCGAAAAACTTGCCTATTTTCGACCGCACTTTTCTTCCCCACCCA
GAATTTTAAACGCGAATAAAATGCCTAAACTTTATTGGTTTTCAGATTCACAAGCAGAAGTTGAAATTAATGGCACCGTA
TCTGCCATATTAATTGCAGAGGGCGATTTAAAATTGACTGGCAAAGGGAGGATTAGTGGCGCAGTGATTACCAGTGGGAA
TTTAACTTTAGATGGCGTAACTTTAGCTTATGGGAAAAAGACGGTGGTTGCTTTAGTGCAACAATATAGTCAGTGGCAGT
TAGCAGAAAAAAGTTGGAGTGATTTTAATGTTCAGGATGAATAA

Domains

Predicted by InterproScan.

Protein of unknown function (DUF2572) (DUF2572)

(5-223)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0D0ILL6

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comP Haemophilus influenzae Rd KW20

96.035

100

0.96

Multiple sequence alignment