Detailed information
Bioinformatically predicted
Overview
| Name | comB | Type | Machinery gene |
| Locus tag | BV122_RS02610 | Genome accession | NZ_CP020009 |
| Coordinates | 509576..510082 (-) | Length | 168 a.a. |
| NCBI ID | WP_011272049.1 | Uniprot ID | Q4QNA7 |
| Organism | Haemophilus influenzae strain 5P54H1 | ||
| Function | type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 504576..515082
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BV122_RS02580 (BV122_525) | nudC | 505069..505863 (-) | 795 | WP_005686893.1 | NAD(+) diphosphatase | - |
| BV122_RS02585 (BV122_526) | nfuA | 505930..506526 (-) | 597 | WP_005649300.1 | Fe-S biogenesis protein NfuA | - |
| BV122_RS02590 (BV122_527) | - | 506602..507288 (-) | 687 | WP_011272045.1 | ComF family protein | - |
| BV122_RS02595 (BV122_528) | comE | 507301..508638 (-) | 1338 | WP_011272046.1 | type IV pilus secretin PilQ | Machinery gene |
| BV122_RS02600 (BV122_529) | comD | 508648..509061 (-) | 414 | WP_011272047.1 | pilus assembly protein PilP | Machinery gene |
| BV122_RS02605 (BV122_530) | comC | 509058..509579 (-) | 522 | WP_011272048.1 | competence protein ComC | Machinery gene |
| BV122_RS02610 (BV122_531) | comB | 509576..510082 (-) | 507 | WP_011272049.1 | competence protein ComB | Machinery gene |
| BV122_RS02615 (BV122_532) | comA | 510083..510880 (-) | 798 | WP_011272050.1 | pilus assembly protein PilM | Machinery gene |
| BV122_RS02620 (BV122_533) | - | 510979..513573 (+) | 2595 | WP_042593320.1 | penicillin-binding protein 1A | - |
| BV122_RS02625 (BV122_534) | - | 513646..514491 (+) | 846 | WP_105182564.1 | 23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ | - |
| BV122_RS02630 (BV122_536) | - | 514660..514989 (+) | 330 | WP_005629464.1 | YbaB/EbfC family nucleoid-associated protein | - |
Sequence
Protein
Download Length: 168 a.a. Molecular weight: 19697.54 Da Isoelectric Point: 7.4684
>NTDB_id=219869 BV122_RS02610 WP_011272049.1 509576..510082(-) (comB) [Haemophilus influenzae strain 5P54H1]
MSMNLLPWRTYQHQKRLRRLAFYIALFILLAINLMLAFSNLIEQQKQNLQAQQTSFEQLNQQLHKTTMQIDQLRSAVKVG
EVLTSIPNEQVKKSLQQLSELPFQQGELNKFKQDANNLSLEGNAQDQTEFELIHQFLKKHFPNVKLSQVQPEQDTLFFHF
DVEQGAEK
MSMNLLPWRTYQHQKRLRRLAFYIALFILLAINLMLAFSNLIEQQKQNLQAQQTSFEQLNQQLHKTTMQIDQLRSAVKVG
EVLTSIPNEQVKKSLQQLSELPFQQGELNKFKQDANNLSLEGNAQDQTEFELIHQFLKKHFPNVKLSQVQPEQDTLFFHF
DVEQGAEK
Nucleotide
Download Length: 507 bp
>NTDB_id=219869 BV122_RS02610 WP_011272049.1 509576..510082(-) (comB) [Haemophilus influenzae strain 5P54H1]
ATGTCGATGAATTTATTGCCTTGGCGTACTTATCAACATCAAAAGCGTTTACGTCGTTTAGCTTTTTATATCGCTTTATT
TATCTTGCTTGCTATTAATTTAATGTTGGCTTTTAGCAATTTGATTGAACAACAGAAACAAAATTTGCAAGCGCAGCAAA
CATCTTTTGAACAACTTAATCAGCAACTTCACAAAACTACCATGCAAATTGATCAGTTACGCAGTGCGGTGAAAGTTGGT
GAAGTTTTGACATCTATTCCCAACGAGCAAGTAAAAAAGAGTTTACAACAGCTAAGTGAATTACCTTTTCAACAAGGAGA
ACTGAATAAATTTAAACAAGATGCCAATAACTTAAGTTTGGAAGGTAACGCGCAAGATCAAACAGAATTTGAACTGATTC
ATCAATTTTTAAAGAAACATTTTCCCAATGTGAAATTAAGTCAGGTTCAACCTGAACAAGATACATTGTTTTTTCACTTT
GATGTGGAACAAGGGGCGGAAAAATGA
ATGTCGATGAATTTATTGCCTTGGCGTACTTATCAACATCAAAAGCGTTTACGTCGTTTAGCTTTTTATATCGCTTTATT
TATCTTGCTTGCTATTAATTTAATGTTGGCTTTTAGCAATTTGATTGAACAACAGAAACAAAATTTGCAAGCGCAGCAAA
CATCTTTTGAACAACTTAATCAGCAACTTCACAAAACTACCATGCAAATTGATCAGTTACGCAGTGCGGTGAAAGTTGGT
GAAGTTTTGACATCTATTCCCAACGAGCAAGTAAAAAAGAGTTTACAACAGCTAAGTGAATTACCTTTTCAACAAGGAGA
ACTGAATAAATTTAAACAAGATGCCAATAACTTAAGTTTGGAAGGTAACGCGCAAGATCAAACAGAATTTGAACTGATTC
ATCAATTTTTAAAGAAACATTTTCCCAATGTGAAATTAAGTCAGGTTCAACCTGAACAAGATACATTGTTTTTTCACTTT
GATGTGGAACAAGGGGCGGAAAAATGA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comB | Haemophilus influenzae 86-028NP |
100 |
100 |
1 |
| comB | Haemophilus influenzae Rd KW20 |
98.81 |
100 |
0.988 |