Detailed information    

insolico Bioinformatically predicted

Overview


Name   chpA   Type   Regulator
Locus tag   BUM88_RS16175 Genome accession   NZ_CP020000
Coordinates   3360770..3365275 (-) Length   1501 a.a.
NCBI ID   WP_080027719.1    Uniprot ID   -
Organism   Acinetobacter calcoaceticus strain CA16     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context


Location: 3355770..3370275
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BUM88_RS16145 (BUM88_16145) elsL 3356551..3357054 (-) 504 WP_080027717.1 cell wall-recycling L,D-carboxypeptidase ElsL -
  BUM88_RS16150 (BUM88_16150) - 3357392..3357751 (-) 360 WP_004639014.1 YbaN family protein -
  BUM88_RS16155 (BUM88_16155) - 3357855..3358736 (+) 882 WP_080027718.1 DUF1853 family protein -
  BUM88_RS16160 (BUM88_16160) - 3358859..3359002 (+) 144 WP_003655297.1 entericidin A/B family lipoprotein -
  BUM88_RS16165 (BUM88_16165) dapE 3359128..3360264 (+) 1137 WP_017392493.1 succinyl-diaminopimelate desuccinylase -
  BUM88_RS16170 (BUM88_16170) - 3360303..3360770 (-) 468 WP_004639007.1 hypothetical protein -
  BUM88_RS16175 (BUM88_16175) chpA 3360770..3365275 (-) 4506 WP_080027719.1 hybrid sensor histidine kinase/response regulator Regulator
  BUM88_RS16180 (BUM88_16180) - 3365424..3367505 (-) 2082 WP_017392491.1 methyl-accepting chemotaxis protein -
  BUM88_RS16185 (BUM88_16185) - 3367548..3368084 (-) 537 WP_080027720.1 chemotaxis protein CheW -
  BUM88_RS16190 (BUM88_16190) - 3368144..3368506 (-) 363 WP_005036319.1 response regulator -
  BUM88_RS16195 (BUM88_16195) pilG 3368530..3368913 (-) 384 WP_000389061.1 twitching motility response regulator PilG Regulator
  BUM88_RS16200 (BUM88_16200) - 3369199..3369837 (+) 639 WP_213033724.1 hypothetical protein -

Sequence


Protein


Download         Length: 1501 a.a.        Molecular weight: 171415.76 Da        Isoelectric Point: 4.4388

>NTDB_id=219732 BUM88_RS16175 WP_080027719.1 3360770..3365275(-) (chpA) [Acinetobacter calcoaceticus strain CA16]
MKEILKTLTEAMMLPEDSYSQQDAEFLDIFVEEIEEIFVELQSLIHEWMQSKNVATLTEIRRHFHTLKGSGRMIAAKSSA
ELAWTVEDTLNRVINESLTLTPNIQQYVQLVFKFYFFKLVDDFKSKKEHAVDFRPLILLGQQLQQQQSLEPALEELLLLS
DTLTAETKTGLEVGDLEQESDNLTLETAVESEHNLAETLVLFMEEAEEHLATIDQFLEQEIHQHESYNALIRALHTLRGS
SAMAQVEAIFDASTKVEHLFKILLQEELSSHSEEILLLRDYRQFIRNCLDLLAAYCSNKQLDSNLKQFNQVWDAYMEQHG
EHASPLMPPHGLVSQLLQLDVSELLDAELDFEKGIRSEFPHYLERLSEQADLLLQHTQSQAMVGLYEYTNQLKDSYDVLL
DRPDLLHSDYVFEIYQKAHQQLIQLFDALAAGQRVSIIEQHQNILEELKLYTQYIPSLNSEPLESHQEVVESLFSADVEQ
TANESSASIESILTDHVVMSQSVHLDRQFMSTEHVNRYFDPELLDIFLEEADELLEGMDTDLNIWVNDQENFAALNNLMR
YLHTLKGGANMIQANYIGLIAHELESIYERLIQRQLITSSALIDFIRLVQDDLADRLQIVREQHLDYAASHTIQALKNAG
KVYNSLGSAAKEIQAESETDVIPESSFAVLQQEAIDNTALNLDELTCNFEQIVESNNRLVEYTELQAFDAEGYTDSIQDQ
DIDSVVEQTFMEEAAELLEMADHLLKQWFEQRTNRSILLQLQRAVHSLKGGSRMVGLETVQAIAYQLENAFEKFALYHFS
SNIYDNLLESAIVWLKEAIFKQNYQHFDGLQQSLENIQFIETAIQIPSKLTRTDLFSTEPVMSFVQGDGAEPPPMMGAWE
QAQHLEQNNEMIRVSADLIEKMIDLSGENSINRSRIEMDLSQFGHTLVEMELAIQRLADQLRRMEGELESQIIAKHGIEH
SRYTEFDPLEMDQYSSLNQLSKSLAESASDLVDFKNTLSEKIRDTESLLVQQSRIQAEIQEGLMRTRLVPFSRLLPRLQR
IVRQTSTALDRPAELFVNNTEGELDRTMLERLVTPLEHMLRNAIDHGLEDRVQREQARKPETGRIELNIHRQGTDVVVTF
KDDGRGIDIEKVRQKALLSGLINSEQVLEHQDILQLIFHPGLSTADQVTQISGRGVGLDVVQSDIKALGGHVSVDSVYGQ
GTIFTIRVPTTVAVSDALMVKVADQQFAIPLAQIDRIVRVSPTSLEQYFGSAQEFFEFENKRYPLRYLSEFVGNQPIPRL
SGMMYSLPVLMIKTNNGQTIALLVDQLIGSRAQIVVKPIGQQFSSIGAIAGATILGDGQVCLILDGQNIARQIQSTRRHK
QLNEAIYRQRESDERRLIMIVDDSVTVRKVTTRLLERQGYDVVTAKDGIDAIEQLENIKPDLMLLDIEMPRMDGFEVLNL
VRHHDLHQDMPVIMITSRTGEKHRERAFTLGVNQYMGKPFQEEDLLHNIDAFFTTREEELA

Nucleotide


Download         Length: 4506 bp        

>NTDB_id=219732 BUM88_RS16175 WP_080027719.1 3360770..3365275(-) (chpA) [Acinetobacter calcoaceticus strain CA16]
ATGAAAGAAATATTAAAAACTTTAACTGAAGCAATGATGCTACCGGAAGATAGCTATTCTCAACAAGATGCTGAATTTCT
TGATATCTTCGTTGAAGAAATTGAAGAAATTTTTGTTGAATTGCAATCTTTGATTCATGAATGGATGCAATCTAAAAATG
TTGCTACGCTGACTGAGATCCGTCGCCATTTTCATACCTTGAAAGGTTCAGGGCGAATGATTGCAGCGAAATCCTCTGCT
GAGCTTGCTTGGACTGTAGAAGATACGCTTAATCGGGTAATCAATGAGAGTCTCACATTAACTCCTAACATCCAACAATA
TGTTCAGTTGGTATTTAAGTTCTATTTCTTTAAATTAGTAGATGACTTTAAATCTAAAAAGGAACATGCAGTAGATTTTA
GACCTCTTATTTTATTGGGACAACAATTACAACAACAGCAAAGTCTAGAGCCTGCTTTAGAAGAACTTTTATTATTGTCG
GATACTCTCACTGCTGAAACTAAGACTGGTTTAGAGGTGGGTGATTTAGAACAGGAATCAGATAATTTAACTCTAGAAAC
CGCCGTAGAAAGTGAACATAACCTTGCTGAAACCTTAGTTTTATTTATGGAAGAAGCGGAGGAGCACTTAGCGACCATCG
ATCAATTCTTAGAACAAGAAATACATCAGCACGAGAGTTACAATGCATTAATCCGTGCATTACATACGTTGCGCGGCAGC
TCGGCAATGGCTCAGGTAGAAGCAATTTTTGATGCCAGTACCAAGGTTGAGCATTTATTCAAAATTCTATTACAAGAAGA
GCTATCTTCTCATTCAGAAGAAATTTTATTACTCCGTGATTATCGTCAGTTTATTCGAAATTGTTTAGATCTATTGGCTG
CGTATTGTTCTAATAAACAATTAGACTCTAACCTGAAACAGTTCAATCAGGTTTGGGATGCTTATATGGAACAGCATGGG
GAACATGCGAGCCCGCTCATGCCTCCACATGGTTTAGTATCTCAGCTGTTACAGCTAGATGTTTCAGAATTACTTGATGC
AGAGTTGGATTTTGAAAAGGGAATTCGTTCTGAGTTTCCTCATTATCTGGAACGTTTAAGTGAACAAGCTGATTTGTTAT
TGCAACATACTCAGTCGCAGGCCATGGTTGGTTTATATGAGTATACGAACCAGCTGAAAGATAGCTATGACGTATTGCTT
GATCGACCTGATTTATTACACTCAGATTATGTTTTTGAAATTTATCAGAAAGCACATCAACAATTAATTCAGTTATTTGA
TGCATTAGCTGCGGGTCAAAGAGTTAGTATTATTGAGCAACACCAAAATATTTTGGAAGAGCTAAAACTATATACCCAAT
ATATTCCAAGCCTTAATTCTGAACCATTAGAAAGTCATCAGGAAGTTGTTGAGTCGCTATTTAGTGCTGATGTAGAACAA
ACAGCAAATGAATCTTCAGCATCTATCGAAAGTATACTAACTGATCATGTAGTCATGAGTCAGAGTGTGCATTTAGATCG
CCAGTTCATGTCTACTGAGCACGTAAACCGTTATTTTGATCCAGAACTGTTAGATATTTTTCTTGAAGAAGCCGATGAGT
TGCTTGAAGGAATGGATACAGATCTTAATATTTGGGTTAATGATCAAGAGAACTTTGCTGCTCTTAATAATCTGATGCGC
TATTTGCATACCTTAAAAGGTGGGGCAAATATGATTCAGGCAAATTATATTGGTTTAATTGCACATGAATTAGAAAGTAT
TTATGAGCGCTTAATTCAAAGACAGTTAATTACTTCATCTGCTCTCATTGATTTTATCCGTCTGGTTCAAGATGATTTAG
CTGATCGCCTACAAATAGTACGTGAACAGCACCTAGATTATGCTGCTTCTCATACTATTCAAGCACTTAAGAATGCAGGT
AAGGTATATAATTCCCTCGGGTCTGCTGCTAAAGAGATACAAGCAGAGTCTGAAACAGATGTTATACCAGAATCAAGTTT
TGCAGTATTACAACAAGAAGCTATAGACAATACTGCGTTAAATCTCGATGAGTTAACTTGTAATTTTGAGCAGATTGTTG
AGTCTAATAATAGACTTGTTGAGTACACAGAATTACAAGCTTTTGATGCAGAAGGCTATACAGACAGTATCCAAGATCAG
GATATTGACTCTGTTGTCGAGCAGACCTTTATGGAGGAAGCGGCCGAGCTGTTAGAGATGGCCGATCACTTATTAAAGCA
GTGGTTTGAGCAGCGTACCAATCGTAGTATCTTGCTTCAGCTACAAAGGGCTGTGCACAGCTTGAAGGGTGGTTCCCGTA
TGGTGGGACTTGAAACCGTACAAGCGATTGCTTATCAACTTGAAAATGCTTTTGAAAAATTTGCGCTTTATCATTTTAGC
TCAAATATTTATGACAACTTGCTAGAGAGTGCGATTGTTTGGTTAAAAGAAGCAATTTTTAAACAAAATTATCAACATTT
CGATGGTTTACAACAAAGTTTAGAAAATATTCAGTTTATTGAAACTGCAATACAGATTCCAAGTAAGTTGACCAGAACTG
ATCTATTTAGCACTGAACCTGTAATGAGCTTTGTGCAAGGTGATGGTGCAGAACCGCCGCCAATGATGGGGGCATGGGAA
CAAGCACAGCATCTTGAACAAAATAATGAGATGATCCGGGTTTCGGCAGATTTAATTGAGAAAATGATTGATTTGTCTGG
TGAAAATTCGATTAACCGTTCACGAATTGAAATGGATCTCAGTCAATTTGGTCATACGTTAGTGGAAATGGAATTAGCCA
TTCAACGACTAGCAGACCAGTTACGTCGAATGGAAGGCGAATTAGAAAGTCAGATTATTGCAAAACACGGTATTGAGCAC
TCTCGTTATACAGAATTTGATCCTCTAGAGATGGACCAATATTCTTCATTGAATCAATTATCGAAATCACTTGCCGAATC
TGCATCGGATTTAGTGGATTTCAAAAATACATTATCTGAAAAAATCAGAGACACCGAAAGTTTGCTGGTACAACAGTCAC
GTATTCAGGCCGAAATTCAAGAAGGCCTAATGCGAACACGATTAGTACCATTCTCTCGATTGCTACCTCGTTTACAAAGA
ATTGTGAGGCAGACTTCGACTGCATTGGATCGACCAGCAGAGCTTTTTGTTAATAATACCGAAGGTGAATTAGACCGGAC
AATGCTAGAACGTTTGGTTACTCCACTTGAGCACATGCTTCGAAATGCAATTGACCATGGTCTAGAAGATCGTGTGCAAC
GTGAACAAGCGCGAAAACCAGAAACTGGACGTATTGAACTGAATATTCATCGTCAAGGTACGGATGTTGTTGTTACATTT
AAGGATGATGGCCGAGGTATTGATATCGAGAAGGTGCGTCAAAAGGCCCTATTATCTGGTTTAATTAATTCTGAACAAGT
ATTAGAACATCAAGATATTTTACAGTTGATTTTCCATCCAGGGTTAAGTACAGCCGATCAAGTTACTCAGATTTCAGGTC
GTGGTGTAGGACTAGATGTTGTACAAAGTGATATTAAAGCTTTGGGCGGACATGTGAGTGTGGACTCTGTGTATGGGCAA
GGAACAATCTTTACAATACGTGTTCCAACCACAGTAGCTGTTAGTGATGCCTTAATGGTTAAAGTGGCTGATCAACAATT
TGCAATTCCTTTGGCTCAAATTGATCGAATTGTTCGAGTTTCACCAACATCATTAGAACAGTATTTTGGAAGTGCACAAG
AATTCTTTGAATTTGAAAATAAACGCTATCCATTACGTTATTTATCTGAGTTTGTTGGTAATCAACCGATTCCGCGTTTA
AGCGGGATGATGTATTCACTACCAGTATTAATGATTAAAACCAATAATGGACAAACAATTGCATTATTGGTTGATCAGCT
TATTGGTTCACGTGCGCAGATTGTGGTCAAGCCAATCGGGCAGCAGTTCTCTAGTATTGGTGCGATTGCAGGTGCAACTA
TTTTAGGTGATGGTCAAGTTTGTCTAATTTTAGATGGACAAAATATTGCTCGCCAAATTCAGTCTACCCGCCGACATAAG
CAGCTTAATGAAGCTATCTATAGACAACGTGAGTCTGATGAACGCCGTCTCATTATGATTGTAGATGACTCTGTCACAGT
CCGTAAGGTAACGACTCGTTTACTCGAACGTCAGGGCTATGACGTAGTAACTGCTAAAGATGGTATTGATGCAATTGAGC
AGTTGGAAAATATTAAACCAGATCTGATGCTGCTTGATATCGAAATGCCGCGAATGGATGGCTTTGAGGTACTTAACCTC
GTACGACATCATGATCTACATCAAGATATGCCAGTCATTATGATTACATCTAGAACTGGCGAAAAACACCGTGAACGAGC
ATTTACTTTAGGGGTTAACCAATACATGGGTAAACCTTTCCAAGAAGAAGACTTACTTCACAATATTGATGCTTTTTTCA
CGACACGTGAAGAGGAACTTGCCTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  chpA Acinetobacter baumannii strain A118

79.285

100

0.798


Multiple sequence alignment