Detailed information
Bioinformatically predicted
Overview
| Name | comEA | Type | Machinery gene |
| Locus tag | BUM88_RS02855 | Genome accession | NZ_CP020000 |
| Coordinates | 598456..598860 (+) | Length | 134 a.a. |
| NCBI ID | WP_080026315.1 | Uniprot ID | - |
| Organism | Acinetobacter calcoaceticus strain CA16 | ||
| Function | dsDNA binding (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 593456..603860
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BUM88_RS02840 (BUM88_02840) | - | 594439..596745 (+) | 2307 | WP_003655013.1 | RelA/SpoT family protein | - |
| BUM88_RS02845 (BUM88_02845) | - | 596795..597568 (-) | 774 | WP_080026313.1 | SDR family oxidoreductase | - |
| BUM88_RS02850 (BUM88_02850) | mazG | 597681..598487 (+) | 807 | WP_080026314.1 | nucleoside triphosphate pyrophosphohydrolase | - |
| BUM88_RS02855 (BUM88_02855) | comEA | 598456..598860 (+) | 405 | WP_080026315.1 | ComEA family DNA-binding protein | Machinery gene |
| BUM88_RS02860 (BUM88_02860) | pcnB | 598986..600449 (+) | 1464 | WP_003655021.1 | polynucleotide adenylyltransferase PcnB | - |
| BUM88_RS02865 (BUM88_02865) | folK | 600446..600928 (+) | 483 | WP_003655023.1 | 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase | - |
| BUM88_RS02870 (BUM88_02870) | panB | 600975..601784 (+) | 810 | WP_003655024.1 | 3-methyl-2-oxobutanoate hydroxymethyltransferase | - |
| BUM88_RS02875 (BUM88_02875) | panC | 601788..602636 (+) | 849 | WP_005036795.1 | pantoate--beta-alanine ligase | - |
| BUM88_RS02880 (BUM88_02880) | rapZ | 602660..603511 (+) | 852 | WP_003655028.1 | RNase adapter RapZ | - |
| BUM88_RS02885 (BUM88_02885) | - | 603508..603777 (+) | 270 | WP_013198928.1 | HPr family phosphocarrier protein | - |
Sequence
Protein
Download Length: 134 a.a. Molecular weight: 15423.72 Da Isoelectric Point: 10.3474
>NTDB_id=219720 BUM88_RS02855 WP_080026315.1 598456..598860(+) (comEA) [Acinetobacter calcoaceticus strain CA16]
MPLSMNLWKSKYYIFIVLFWSLISSTLIHAQSFDQNFKEWKAKQQMYDQKLSTQHSSHSNAPKSSIMTDSSGQVHLNQAN
IDELQKLKGIGEKKAQAIVEYRQKNGGFKNIDEFKNVKGIGPVIFEKNKTRLSL
MPLSMNLWKSKYYIFIVLFWSLISSTLIHAQSFDQNFKEWKAKQQMYDQKLSTQHSSHSNAPKSSIMTDSSGQVHLNQAN
IDELQKLKGIGEKKAQAIVEYRQKNGGFKNIDEFKNVKGIGPVIFEKNKTRLSL
Nucleotide
Download Length: 405 bp
>NTDB_id=219720 BUM88_RS02855 WP_080026315.1 598456..598860(+) (comEA) [Acinetobacter calcoaceticus strain CA16]
ATGCCGCTCAGCATGAATCTTTGGAAGAGTAAATATTATATTTTTATTGTTTTATTTTGGAGCCTGATTTCATCAACATT
GATTCATGCCCAATCTTTTGATCAAAACTTTAAGGAGTGGAAAGCTAAACAGCAGATGTATGATCAGAAGTTAAGCACGC
AGCATTCCTCTCATTCTAATGCCCCAAAAAGTTCAATAATGACTGATTCTTCAGGGCAGGTGCACTTGAATCAAGCCAAT
ATTGATGAGCTTCAAAAGCTAAAAGGGATTGGTGAGAAAAAGGCTCAGGCGATTGTAGAATACCGCCAAAAGAATGGCGG
TTTTAAAAATATTGATGAATTTAAAAACGTAAAAGGCATTGGTCCAGTCATTTTTGAAAAGAATAAAACACGGTTGAGTT
TATAA
ATGCCGCTCAGCATGAATCTTTGGAAGAGTAAATATTATATTTTTATTGTTTTATTTTGGAGCCTGATTTCATCAACATT
GATTCATGCCCAATCTTTTGATCAAAACTTTAAGGAGTGGAAAGCTAAACAGCAGATGTATGATCAGAAGTTAAGCACGC
AGCATTCCTCTCATTCTAATGCCCCAAAAAGTTCAATAATGACTGATTCTTCAGGGCAGGTGCACTTGAATCAAGCCAAT
ATTGATGAGCTTCAAAAGCTAAAAGGGATTGGTGAGAAAAAGGCTCAGGCGATTGTAGAATACCGCCAAAAGAATGGCGG
TTTTAAAAATATTGATGAATTTAAAAACGTAAAAGGCATTGGTCCAGTCATTTTTGAAAAGAATAAAACACGGTTGAGTT
TATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comEA | Acinetobacter baumannii strain A118 |
67.883 |
100 |
0.694 |
| comEA | Acinetobacter baumannii D1279779 |
66.423 |
100 |
0.679 |
| comEA | Acinetobacter baylyi ADP1 |
41.935 |
92.537 |
0.388 |