Detailed information    

insolico Bioinformatically predicted

Overview

Name   yaaT   Type   Regulator
Locus tag   LLG50_RS02050 Genome accession   NZ_CP025500
Coordinates   410055..410837 (+) Length   260 a.a.
NCBI ID   WP_010905316.1    Uniprot ID   Q9CIG2
Organism   Lactococcus lactis subsp. lactis strain G50     
Function   accelerate the production of Spo0A~P (predicted from homology)   
Competence regulation

Genomic Context

Location: 405055..415837
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  LLG50_RS02025 (LLG50_02025) vicX 405078..405890 (-) 813 WP_003131583.1 MBL fold metallo-hydrolase Regulator
  LLG50_RS02030 (LLG50_02030) vicK 406061..407503 (-) 1443 WP_010905315.1 sensor histidine kinase Regulator
  LLG50_RS02035 (LLG50_02035) yycF 407496..408197 (-) 702 WP_003131580.1 response regulator YycF -
  LLG50_RS02040 (LLG50_02040) tmk 408375..409010 (+) 636 WP_103054462.1 dTMP kinase -
  LLG50_RS02045 (LLG50_02045) - 409143..410003 (+) 861 WP_057719679.1 DNA polymerase III subunit delta' -
  LLG50_RS02050 (LLG50_02050) yaaT 410055..410837 (+) 783 WP_010905316.1 PSP1 domain-containing protein Regulator
  LLG50_RS02055 (LLG50_02055) yabA 410830..411156 (+) 327 WP_003131570.1 DNA replication initiation control protein YabA -
  LLG50_RS02060 (LLG50_02060) rsmI 411156..412031 (+) 876 WP_103054463.1 16S rRNA (cytidine(1402)-2'-O)-methyltransferase -
  LLG50_RS02065 (LLG50_02065) - 412108..412299 (-) 192 WP_003131566.1 hypothetical protein -
  LLG50_RS02070 (LLG50_02070) mvk 412362..413294 (-) 933 WP_003131564.1 mevalonate kinase -
  LLG50_RS02075 (LLG50_02075) mvaD 413600..414556 (+) 957 WP_058219167.1 diphosphomevalonate decarboxylase -
  LLG50_RS02080 (LLG50_02080) - 414543..415532 (+) 990 WP_021721904.1 mevalonate kinase -

Sequence

Protein


Download         Length: 260 a.a.        Molecular weight: 29803.27 Da        Isoelectric Point: 6.0566

>NTDB_id=219153 LLG50_RS02050 WP_010905316.1 410055..410837(+) (yaaT) [Lactococcus lactis subsp. lactis strain G50]
MIYEIKFAHGESNVFAISDIELAPQTEVILRSDKGNFYGKIVREISEEANLEIHHTIVREVNEDDLQVIAKLEERSKQAK
DKVRQLVIEQGLEMKIIDVAYNFDQMQLFISFTAENRVDFRLLLRELATTFRIRIELRQIGPRDAAKIHGGLGPCGRPLC
CSEFVYEFPNVSIKMAKNQNLSLKQNKLNGLCGRLMCCLTYEDSFYKEAQQLFPDFGEFVTTSEGKGKVVGLNVLKNRVK
IRFGEYSKDFELAEIEVNHG

Nucleotide


Download         Length: 783 bp        

>NTDB_id=219153 LLG50_RS02050 WP_010905316.1 410055..410837(+) (yaaT) [Lactococcus lactis subsp. lactis strain G50]
ATGATTTATGAAATAAAATTTGCACATGGCGAATCAAATGTATTTGCAATAAGTGATATAGAACTTGCTCCACAAACAGA
AGTTATCCTTCGTTCAGATAAGGGAAACTTTTACGGAAAAATTGTACGTGAAATTTCTGAAGAAGCGAATCTTGAAATTC
ACCACACGATTGTGCGTGAAGTGAATGAGGATGATCTCCAAGTTATTGCAAAACTTGAAGAACGTTCTAAACAAGCCAAA
GATAAAGTTCGCCAACTTGTCATCGAACAAGGTTTGGAAATGAAAATTATTGATGTGGCTTATAATTTTGACCAAATGCA
ACTTTTTATTTCGTTTACGGCAGAGAATCGTGTTGATTTTCGATTGCTTTTGCGTGAGTTGGCAACAACTTTTAGAATTA
GGATTGAACTTCGCCAAATTGGACCAAGAGATGCGGCGAAAATTCATGGTGGACTTGGACCTTGTGGGCGTCCTTTGTGC
TGTTCTGAGTTTGTTTATGAATTTCCAAATGTTTCAATCAAAATGGCCAAAAATCAAAATCTATCTTTGAAACAAAATAA
ATTGAACGGTCTTTGCGGTCGTTTGATGTGCTGTTTAACTTATGAAGATAGTTTTTATAAAGAAGCCCAACAACTTTTCC
CAGATTTTGGTGAGTTTGTAACTACTTCAGAGGGAAAAGGAAAAGTTGTTGGCTTAAATGTTTTAAAAAATAGAGTAAAA
ATCCGCTTTGGAGAATATAGCAAGGATTTTGAACTTGCAGAAATTGAGGTGAATCATGGCTGA

Domains

Predicted by InterProScan.

PSP1 C-terminal conserved region (PSP1)

(56-140)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB Q9CIG2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  yaaT Bacillus subtilis subsp. subtilis str. 168

46.119

84.231

0.388