Detailed information    

insolico Bioinformatically predicted

Overview

Name   comEA   Type   Machinery gene
Locus tag   AOZ05_RS08815 Genome accession   NZ_CP019945
Coordinates   1710937..1711623 (-) Length   228 a.a.
NCBI ID   WP_072361794.1    Uniprot ID   -
Organism   Staphylococcus aureus strain BA01611     
Function   dsDNA binding to the cell surface (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1705937..1716623
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AOZ05_RS08795 rpsT 1706851..1707102 (+) 252 WP_001274017.1 30S ribosomal protein S20 -
  AOZ05_RS08800 holA 1707147..1708121 (-) 975 WP_031587652.1 DNA polymerase III subunit delta -
  AOZ05_RS08805 comEC 1708178..1710379 (-) 2202 WP_025174327.1 DNA internalization-related competence protein ComEC/Rec2 Machinery gene
  AOZ05_RS08810 - 1710384..1710845 (-) 462 WP_000439693.1 ComE operon protein 2 -
  AOZ05_RS08815 comEA 1710937..1711623 (-) 687 WP_072361794.1 ComEA family DNA-binding protein Machinery gene
  AOZ05_RS08820 - 1711663..1712379 (-) 717 WP_000084822.1 class I SAM-dependent DNA methyltransferase -
  AOZ05_RS08825 rsfS 1712382..1712735 (-) 354 WP_001088020.1 ribosome silencing factor -
  AOZ05_RS08830 yqeK 1712736..1713320 (-) 585 WP_001019326.1 bis(5'-nucleosyl)-tetraphosphatase (symmetrical) YqeK -
  AOZ05_RS08835 nadD 1713310..1713879 (-) 570 WP_000725162.1 nicotinate (nicotinamide) nucleotide adenylyltransferase -
  AOZ05_RS08840 yhbY 1713882..1714172 (-) 291 WP_000627815.1 ribosome assembly RNA-binding protein YhbY -
  AOZ05_RS08845 aroE 1714176..1714982 (-) 807 WP_000666761.1 shikimate dehydrogenase -
  AOZ05_RS08850 yqeH 1714996..1716096 (-) 1101 WP_001280141.1 ribosome biogenesis GTPase YqeH -

Sequence

Protein


Download         Length: 228 a.a.        Molecular weight: 25863.49 Da        Isoelectric Point: 9.3305

>NTDB_id=219046 AOZ05_RS08815 WP_072361794.1 1710937..1711623(-) (comEA) [Staphylococcus aureus strain BA01611]
MVLLYQFLLRYKDFLTQWKLYIISAVVLIMVLIGFIFWRQDDYTSRNFENKDTALKQSTSENSSLSKVEDVQVKDGDNSK
NKGPVYVDVKGAVKHPNVYKMTSKDRVVDLLDKAQLLEDADVSQINLSEKLTDQKMIFIPHKGQKNVEPQIEVNSVHEKN
GNTNNTKVNLNTASVSELMSVPGVGQAKANAIVEYRNQQGAFQEIDDLKKVKGFGSKTFDKLKSYFTT

Nucleotide


Download         Length: 687 bp        

>NTDB_id=219046 AOZ05_RS08815 WP_072361794.1 1710937..1711623(-) (comEA) [Staphylococcus aureus strain BA01611]
GTGGTTTTATTGTATCAATTTTTATTACGCTATAAAGATTTTTTAACTCAATGGAAGTTATATATTATAAGTGCTGTTGT
TTTAATTATGGTATTAATTGGTTTTATATTCTGGAGACAAGATGATTATACTTCAAGAAATTTTGAAAATAAAGATACTG
CTCTGAAACAAAGCACTAGTGAAAATAGTAGTTTGTCCAAAGTAGAAGATGTCCAGGTCAAAGATGGAGATAATTCCAAA
AATAAGGGTCCTGTATATGTCGATGTAAAAGGTGCTGTTAAACATCCTAATGTTTATAAAATGACATCTAAGGATAGAGT
AGTTGATTTACTTGATAAAGCACAATTATTGGAGGATGCAGATGTAAGTCAAATTAATTTGTCTGAAAAATTAACAGATC
AAAAAATGATTTTCATACCTCATAAAGGACAAAAGAATGTTGAACCACAAATTGAAGTAAACAGTGTGCACGAAAAAAAT
GGGAACACAAATAATACTAAAGTAAATTTAAATACGGCATCTGTATCAGAATTGATGTCTGTTCCTGGAGTTGGGCAAGC
TAAAGCTAATGCAATTGTTGAATATCGCAACCAACAAGGTGCATTTCAAGAAATTGACGATTTGAAAAAAGTAAAAGGTT
TTGGAAGTAAAACTTTTGATAAACTGAAATCTTATTTCACGACATAA

Domains

Predicted by InterproScan.

Helix-hairpin-helix motif (HHH_3)

(164-227)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comEA Staphylococcus aureus MW2

98.678

99.561

0.982
  comEA Staphylococcus aureus N315

97.797

99.561

0.974

Multiple sequence alignment