Detailed information
Bioinformatically predicted
Overview
| Name | pilJ | Type | Machinery gene |
| Locus tag | B2G52_RS06485 | Genome accession | NZ_CP019894 |
| Coordinates | 1158507..1159448 (+) | Length | 313 a.a. |
| NCBI ID | WP_003712876.1 | Uniprot ID | A0AAU8VGA0 |
| Organism | Neisseria lactamica strain Y92-1009 | ||
| Function | type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1153507..1164448
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| B2G52_RS06455 (B2G52_06455) | - | 1154504..1154836 (+) | 333 | WP_003712867.1 | hypothetical protein | - |
| B2G52_RS06460 (B2G52_06460) | - | 1154901..1155482 (-) | 582 | WP_003712868.1 | superoxide dismutase | - |
| B2G52_RS06470 (B2G52_06470) | dnaB | 1155648..1157060 (+) | 1413 | WP_003712870.1 | replicative DNA helicase | - |
| B2G52_RS06475 (B2G52_06475) | pilH | 1157205..1157870 (+) | 666 | WP_003707444.1 | Tfp pilus assembly protein FimT/FimU | Machinery gene |
| B2G52_RS06480 (B2G52_06480) | pilI | 1157899..1158510 (+) | 612 | WP_003712874.1 | type IV pilus modification protein PilV | Machinery gene |
| B2G52_RS06485 (B2G52_06485) | pilJ | 1158507..1159448 (+) | 942 | WP_003712876.1 | PilW family protein | Machinery gene |
| B2G52_RS06490 (B2G52_06490) | pilK | 1159427..1160023 (+) | 597 | WP_003707450.1 | PilX N-terminal domain-containing pilus assembly protein | Machinery gene |
| B2G52_RS06495 (B2G52_06495) | pilL | 1160025..1160498 (+) | 474 | WP_025457170.1 | PilX family type IV pilin | Machinery gene |
| B2G52_RS06500 (B2G52_06500) | - | 1160568..1160876 (-) | 309 | WP_003707454.1 | AzlD family protein | - |
| B2G52_RS06505 (B2G52_06505) | - | 1160873..1161583 (-) | 711 | WP_045750211.1 | AzlC family ABC transporter permease | - |
| B2G52_RS06510 (B2G52_06510) | dut | 1161725..1162177 (+) | 453 | WP_003712881.1 | dUTP diphosphatase | - |
| B2G52_RS06515 (B2G52_06515) | dapC | 1162255..1163442 (+) | 1188 | WP_003712882.1 | succinyldiaminopimelate transaminase | - |
| B2G52_RS06520 (B2G52_06520) | yaaA | 1163597..1164376 (+) | 780 | WP_003712884.1 | peroxide stress protein YaaA | - |
Sequence
Protein
Download Length: 313 a.a. Molecular weight: 34053.59 Da Isoelectric Point: 8.4293
>NTDB_id=218736 B2G52_RS06485 WP_003712876.1 1158507..1159448(+) (pilJ) [Neisseria lactamica strain Y92-1009]
MKRKMLNVPKGSYDGMKGFTIVEFLVAGLLSMIVLMAVGSSYFTSRKLNDAANERLAAQQDLRNAATLIVRDARMAGGFG
CFNMSEHPATDVISDTTQQNSPFSLKRNGIDKLIPIAESSNIGYPGFTQSGKALIFQYGIDDANASAATTVVSSCAAISK
PGKQILTLENVKKELKIPDTDNRQNGNIARQRHEVNAYAVGKISDEEGLFRFQLNTNGGWGNPQLLVKKITHMNVRYIYV
SDCPEDEDAGKEEKFKYTDKFDSSKGAVTPAGVEVLLNSGTDIKIAASSDNNIYAYRIDATIRGGNVCANRTL
MKRKMLNVPKGSYDGMKGFTIVEFLVAGLLSMIVLMAVGSSYFTSRKLNDAANERLAAQQDLRNAATLIVRDARMAGGFG
CFNMSEHPATDVISDTTQQNSPFSLKRNGIDKLIPIAESSNIGYPGFTQSGKALIFQYGIDDANASAATTVVSSCAAISK
PGKQILTLENVKKELKIPDTDNRQNGNIARQRHEVNAYAVGKISDEEGLFRFQLNTNGGWGNPQLLVKKITHMNVRYIYV
SDCPEDEDAGKEEKFKYTDKFDSSKGAVTPAGVEVLLNSGTDIKIAASSDNNIYAYRIDATIRGGNVCANRTL
Nucleotide
Download Length: 942 bp
>NTDB_id=218736 B2G52_RS06485 WP_003712876.1 1158507..1159448(+) (pilJ) [Neisseria lactamica strain Y92-1009]
ATGAAACGTAAAATGCTAAACGTACCAAAAGGCAGTTATGATGGTATGAAGGGTTTTACCATTGTTGAATTTCTGGTTGC
AGGTCTGCTCAGTATGATTGTCCTGATGGCGGTCGGATCGAGTTACTTTACGTCTCGGAAATTAAATGATGCGGCAAACG
AGCGTCTTGCCGCGCAACAGGATTTGCGGAATGCGGCAACATTGATTGTCCGCGATGCGAGAATGGCGGGCGGCTTCGGT
TGTTTCAATATGTCCGAGCATCCTGCAACTGATGTTATTTCCGATACGACGCAACAAAATTCTCCTTTTTCCTTAAAAAG
GAACGGTATAGATAAACTTATTCCCATAGCGGAATCTTCAAATATCGGATATCCGGGTTTTACCCAGTCCGGTAAGGCAT
TGATTTTCCAATACGGTATCGATGATGCTAATGCAAGCGCCGCGACTACCGTCGTCAGCAGCTGTGCCGCAATATCGAAA
CCGGGCAAGCAAATCCTTACTTTAGAAAATGTAAAAAAAGAATTGAAGATTCCGGATACGGATAACAGGCAAAATGGCAA
TATTGCGCGGCAAAGGCATGAGGTCAATGCCTATGCGGTCGGCAAGATTTCTGATGAGGAGGGTTTGTTCCGCTTCCAAT
TGAATACTAATGGCGGATGGGGTAATCCTCAGTTGCTCGTGAAAAAAATTACCCATATGAATGTACGGTATATCTATGTT
TCCGATTGTCCTGAAGATGAAGATGCCGGCAAAGAGGAAAAATTCAAATATACGGATAAATTCGACAGTTCCAAAGGTGC
TGTTACGCCTGCCGGGGTGGAAGTTTTATTGAATAGCGGTACTGATATCAAGATTGCCGCTTCTTCAGACAATAATATTT
ATGCTTACCGTATCGATGCGACAATACGCGGGGGAAATGTATGCGCAAACAGAACACTTTGA
ATGAAACGTAAAATGCTAAACGTACCAAAAGGCAGTTATGATGGTATGAAGGGTTTTACCATTGTTGAATTTCTGGTTGC
AGGTCTGCTCAGTATGATTGTCCTGATGGCGGTCGGATCGAGTTACTTTACGTCTCGGAAATTAAATGATGCGGCAAACG
AGCGTCTTGCCGCGCAACAGGATTTGCGGAATGCGGCAACATTGATTGTCCGCGATGCGAGAATGGCGGGCGGCTTCGGT
TGTTTCAATATGTCCGAGCATCCTGCAACTGATGTTATTTCCGATACGACGCAACAAAATTCTCCTTTTTCCTTAAAAAG
GAACGGTATAGATAAACTTATTCCCATAGCGGAATCTTCAAATATCGGATATCCGGGTTTTACCCAGTCCGGTAAGGCAT
TGATTTTCCAATACGGTATCGATGATGCTAATGCAAGCGCCGCGACTACCGTCGTCAGCAGCTGTGCCGCAATATCGAAA
CCGGGCAAGCAAATCCTTACTTTAGAAAATGTAAAAAAAGAATTGAAGATTCCGGATACGGATAACAGGCAAAATGGCAA
TATTGCGCGGCAAAGGCATGAGGTCAATGCCTATGCGGTCGGCAAGATTTCTGATGAGGAGGGTTTGTTCCGCTTCCAAT
TGAATACTAATGGCGGATGGGGTAATCCTCAGTTGCTCGTGAAAAAAATTACCCATATGAATGTACGGTATATCTATGTT
TCCGATTGTCCTGAAGATGAAGATGCCGGCAAAGAGGAAAAATTCAAATATACGGATAAATTCGACAGTTCCAAAGGTGC
TGTTACGCCTGCCGGGGTGGAAGTTTTATTGAATAGCGGTACTGATATCAAGATTGCCGCTTCTTCAGACAATAATATTT
ATGCTTACCGTATCGATGCGACAATACGCGGGGGAAATGTATGCGCAAACAGAACACTTTGA
Domains
No domain identified.
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilJ | Neisseria gonorrhoeae MS11 |
79.747 |
100 |
0.805 |