Detailed information    

insolico Bioinformatically predicted

Overview

Name   dsbA1   Type   Machinery gene
Locus tag   B2G52_RS02965 Genome accession   NZ_CP019894
Coordinates   509279..509977 (+) Length   232 a.a.
NCBI ID   WP_004467667.1    Uniprot ID   A0AAU8VSW4
Organism   Neisseria lactamica strain Y92-1009     
Function   DNA binding and uptake; interact with PilQ (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 504279..514977
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  B2G52_RS02945 (B2G52_02945) trpC 505631..506413 (-) 783 WP_004467672.1 indole-3-glycerol phosphate synthase TrpC -
  B2G52_RS02950 (B2G52_02950) - 506464..507420 (-) 957 WP_004467671.1 YheT family hydrolase -
  B2G52_RS02955 (B2G52_02955) murJ 507523..509061 (-) 1539 WP_004467669.1 murein biosynthesis integral membrane protein MurJ -
  B2G52_RS02960 (B2G52_02960) - 509061..509252 (-) 192 WP_002215672.1 hypothetical protein -
  B2G52_RS02965 (B2G52_02965) dsbA1 509279..509977 (+) 699 WP_004467667.1 thiol:disulfide interchange protein DsbA/DsbL Machinery gene
  B2G52_RS02970 (B2G52_02970) amgK 510034..511038 (-) 1005 WP_004467665.1 N-acetylmuramate/N-acetylglucosamine kinase AmgK -
  B2G52_RS02975 (B2G52_02975) - 511108..513513 (+) 2406 WP_045750143.1 LPS-assembly protein LptD -
  B2G52_RS02980 (B2G52_02980) - 513610..514593 (+) 984 WP_004467662.1 peptidylprolyl isomerase -
  B2G52_RS02985 (B2G52_02985) - 514705..514869 (+) 165 WP_003712308.1 hypothetical protein -

Sequence

Protein


Download         Length: 232 a.a.        Molecular weight: 25217.83 Da        Isoelectric Point: 5.9457

>NTDB_id=218718 B2G52_RS02965 WP_004467667.1 509279..509977(+) (dsbA1) [Neisseria lactamica strain Y92-1009]
MKSRHLALGVAALFALAACDSKVQTSVPADSAPAASAAAAPAGLVEGQNYTVLANPIPQQQTGKVEVLEFFGYFCPHCAH
LEPVLSKHAKSFKDDMYLRTEHVVWQKEMLPLARLAAAVDMAAADSKDVANSHIFDAMVNQKIKLQNPEVLKKWLGEQTA
FDGKKVLAAYESPESQARAGKMQELTETFQIDGTPTVIVGGKYKVEFADWESGMNTIDLLADKVREEQKAAQ

Nucleotide


Download         Length: 699 bp        

>NTDB_id=218718 B2G52_RS02965 WP_004467667.1 509279..509977(+) (dsbA1) [Neisseria lactamica strain Y92-1009]
ATGAAATCCAGACACCTCGCCCTCGGCGTTGCCGCCCTGTTCGCCCTTGCCGCGTGCGACAGCAAAGTCCAAACCAGCGT
CCCCGCCGACAGCGCGCCTGCCGCTTCGGCAGCCGCCGCCCCGGCAGGGCTGGTCGAAGGGCAAAACTACACCGTCCTTG
CCAACCCGATTCCCCAACAGCAGACAGGCAAGGTTGAAGTGCTCGAATTTTTCGGCTACTTCTGTCCGCACTGCGCCCAC
CTCGAACCTGTTTTGAGCAAACACGCCAAGTCTTTTAAAGACGATATGTACCTGCGTACCGAACACGTTGTCTGGCAGAA
AGAAATGCTGCCGCTCGCCCGCCTTGCCGCCGCCGTCGATATGGCTGCCGCCGACAGCAAAGATGTGGCGAACAGCCATA
TTTTCGATGCGATGGTCAACCAAAAAATCAAGCTGCAAAATCCGGAAGTCCTCAAAAAATGGCTGGGCGAACAAACCGCC
TTTGACGGCAAAAAAGTCCTTGCCGCCTACGAATCTCCCGAAAGCCAGGCGCGTGCCGGCAAAATGCAGGAGCTGACCGA
AACCTTCCAAATCGACGGTACGCCCACGGTTATCGTCGGCGGCAAATATAAAGTCGAATTTGCCGACTGGGAGTCCGGTA
TGAACACCATCGACCTTTTGGCGGACAAAGTACGCGAAGAACAAAAAGCCGCGCAGTAA

Domains

Predicted by InterproScan.

Thioredoxin (Thioredoxin_4)

(63-212)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dsbA1 Neisseria meningitidis MC58

98.707

100

0.987
  dsbA2 Neisseria meningitidis MC58

76.19

81.466

0.621

Multiple sequence alignment