Detailed information NTG0217477

Bioinformatically predicted

Overview

• Name: ccpA
• Type: Regulator
• Locus tag: CXB69_RS03500
• Genome accession: NZ_CP025206
• Coordinates: 670620..671621 (-)
• Length: 333 a.a.
• NCBI ID: WP_016264677.1
• Uniprot ID: -
• Organism: Latilactobacillus sakei strain WiKim0074
• Function: regulate comCDE transcription and transformation (predicted from homology) Competence regulation

Genomic Context

Location: 665620..676621

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
CXB69_RS03485 (CXB69_03480)	-	666099..666773 (-)	675	WP_035148028.1	helix-turn-helix domain-containing protein	-
CXB69_RS03490 (CXB69_03485)	-	667026..667733 (-)	708	WP_011374126.1	glucosamine-6-phosphate deaminase	-
CXB69_RS03495 (CXB69_03490)	-	668017..670572 (+)	2556	WP_035147028.1	transglycosylase domain-containing protein	-
CXB69_RS03500 (CXB69_03495)	ccpA	670620..671621 (-)	1002	WP_016264677.1	catabolite control protein A	Regulator
CXB69_RS03505 (CXB69_03500)	-	671838..672935 (+)	1098	WP_016264676.1	M24 family metallopeptidase	-
CXB69_RS03510 (CXB69_03505)	-	673529..673966 (-)	438	WP_016264675.1	YtxH domain-containing protein	-
CXB69_RS03515 (CXB69_03510)	-	673972..674406 (-)	435	WP_016264674.1	DUF948 domain-containing protein	-
CXB69_RS03520 (CXB69_03515)	-	674564..675451 (+)	888	WP_011374119.1	mechanosensitive ion channel family protein	-
CXB69_RS03525 (CXB69_03520)	-	675476..676372 (+)	897	WP_016264673.1	DUF368 domain-containing protein	-

Sequence

Protein

• Length: 333 a.a.
• Molecular weight: 36333.50 Da
• Isoelectric Point: 4.7948

>NTDB_id=217477 CXB69_RS03500 WP_016264677.1 670620..671621(-) (ccpA) [Latilactobacillus sakei strain WiKim0074]
MEKQTITIYDVAREADVSMATVSRVVNGNPNVKPATRKKVLEVIDRLDYRPNAVARGLASKKTTTVGVIIPDVSDIYFAS
LARGIDDVATMYKYNIILANSDENNQKEVQVLNTLLAKQVDGLIYMGHSISDAIRAEFARSKTPIVLAGSIDPDEQVGSV
NIDYVAAVKDATLKLIKNGNEKVAFICGNLDFPINSKYRLRGYKDALNEAGIPYDESLIFETEYSYSAGEALFGKVQATG
ATAAVVSDDELAVGVLNAAVDAGVNIPTDFEIVTSNNTKLTEMVRPKMTSISQPLYDMGAVGMRLLTKMMNKEEIDDKTI
LLPYSIVDRQSTK

Nucleotide

• Length: 1002 bp

>NTDB_id=217477 CXB69_RS03500 WP_016264677.1 670620..671621(-) (ccpA) [Latilactobacillus sakei strain WiKim0074]
ATGGAAAAACAAACAATTACAATTTACGACGTTGCGCGTGAAGCTGACGTATCAATGGCGACTGTCTCACGGGTTGTTAA
CGGGAACCCCAACGTTAAGCCTGCCACTCGCAAGAAAGTGCTTGAAGTGATCGACCGTTTAGACTATCGTCCTAACGCTG
TTGCTCGTGGTTTGGCAAGTAAGAAAACAACAACTGTTGGGGTTATTATCCCAGACGTTAGTGATATCTACTTTGCTTCA
TTAGCACGCGGGATTGATGATGTTGCCACAATGTACAAGTACAACATCATTTTAGCGAACTCAGATGAAAACAACCAAAA
GGAAGTTCAAGTATTGAATACCTTATTGGCAAAACAAGTAGATGGTTTAATCTACATGGGTCACAGTATCTCAGATGCAA
TCCGTGCTGAATTCGCCCGTTCTAAGACACCAATCGTATTAGCTGGTTCAATCGATCCAGACGAACAAGTCGGTAGTGTT
AATATTGACTACGTTGCAGCCGTTAAGGACGCAACTTTGAAGTTAATCAAGAACGGTAACGAAAAAGTCGCCTTCATCTG
TGGCAACTTAGATTTTCCAATCAACAGCAAATATCGTTTACGTGGCTATAAAGATGCCTTGAACGAAGCTGGTATTCCTT
ATGACGAAAGCTTAATTTTCGAAACAGAATACAGTTACAGTGCTGGTGAAGCCTTATTCGGTAAGGTTCAAGCAACTGGC
GCAACTGCTGCTGTTGTCAGTGACGATGAATTAGCCGTAGGTGTTTTAAATGCTGCTGTTGATGCAGGGGTTAATATTCC
AACTGACTTTGAAATTGTGACAAGTAATAACACGAAGTTAACTGAAATGGTTCGTCCTAAGATGACATCAATCTCACAAC
CTTTATATGATATGGGTGCTGTTGGGATGCGTCTGTTAACGAAGATGATGAACAAAGAAGAAATCGATGATAAGACAATC
CTATTGCCATATAGTATTGTTGATCGTCAATCAACTAAATAA

Domains

Predicted by InterProScan.

• Periplasmic binding protein-like domain (Peripla_BP_3) (175-332)

• Bacterial regulatory proteins, lacI family (LacI) (7-52)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ccpA	Streptococcus pneumoniae D39	62.31	98.799	0.616
ccpA	Streptococcus gordonii str. Challis substr. CH1	60.486	98.799	0.598
ccpA	Lactococcus lactis subsp. lactis strain DGCC12653	56.456	100	0.565