Detailed information NTG0217411

Bioinformatically predicted

Overview

• Name: ccpA
• Type: Regulator
• Locus tag: CW750_RS06265
• Genome accession: NZ_CP025136
• Coordinates: 1296764..1297765 (+)
• Length: 333 a.a.
• NCBI ID: WP_016264677.1
• Uniprot ID: -
• Organism: Latilactobacillus sakei strain WiKim0072
• Function: regulate comCDE transcription and transformation (predicted from homology) Competence regulation

Genomic Context

Location: 1291764..1302765

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
CW750_RS06240 (CW750_06235)	-	1292013..1292909 (-)	897	WP_016264673.1	DUF368 domain-containing protein	-
CW750_RS06245 (CW750_06240)	-	1292934..1293821 (-)	888	WP_011374119.1	mechanosensitive ion channel family protein	-
CW750_RS06250 (CW750_06245)	-	1293979..1294413 (+)	435	WP_016264674.1	DUF948 domain-containing protein	-
CW750_RS06255 (CW750_06250)	-	1294419..1294856 (+)	438	WP_016264675.1	YtxH domain-containing protein	-
CW750_RS06260 (CW750_06255)	-	1295450..1296547 (-)	1098	WP_016264676.1	Xaa-Pro peptidase family protein	-
CW750_RS06265 (CW750_06260)	ccpA	1296764..1297765 (+)	1002	WP_016264677.1	catabolite control protein A	Regulator
CW750_RS06270 (CW750_06265)	-	1297813..1300368 (-)	2556	WP_035147028.1	transglycosylase domain-containing protein	-
CW750_RS06275 (CW750_06270)	-	1300652..1301359 (+)	708	WP_011374126.1	glucosamine-6-phosphate deaminase	-
CW750_RS06280 (CW750_06275)	-	1301565..1302269 (-)	705	WP_035147031.1	DUF4811 domain-containing protein	-

Sequence

Protein

• Length: 333 a.a.
• Molecular weight: 36333.50 Da
• Isoelectric Point: 4.7948

>NTDB_id=217411 CW750_RS06265 WP_016264677.1 1296764..1297765(+) (ccpA) [Latilactobacillus sakei strain WiKim0072]
MEKQTITIYDVAREADVSMATVSRVVNGNPNVKPATRKKVLEVIDRLDYRPNAVARGLASKKTTTVGVIIPDVSDIYFAS
LARGIDDVATMYKYNIILANSDENNQKEVQVLNTLLAKQVDGLIYMGHSISDAIRAEFARSKTPIVLAGSIDPDEQVGSV
NIDYVAAVKDATLKLIKNGNEKVAFICGNLDFPINSKYRLRGYKDALNEAGIPYDESLIFETEYSYSAGEALFGKVQATG
ATAAVVSDDELAVGVLNAAVDAGVNIPTDFEIVTSNNTKLTEMVRPKMTSISQPLYDMGAVGMRLLTKMMNKEEIDDKTI
LLPYSIVDRQSTK

Nucleotide

• Length: 1002 bp

>NTDB_id=217411 CW750_RS06265 WP_016264677.1 1296764..1297765(+) (ccpA) [Latilactobacillus sakei strain WiKim0072]
ATGGAAAAACAAACAATTACAATTTACGACGTTGCGCGTGAAGCTGACGTATCAATGGCGACTGTCTCACGGGTTGTTAA
CGGGAACCCCAACGTTAAGCCTGCCACTCGCAAGAAAGTGCTTGAAGTGATCGACCGTTTAGACTATCGTCCTAACGCTG
TTGCTCGTGGTTTGGCAAGTAAGAAAACAACAACTGTTGGGGTTATTATCCCAGACGTTAGTGATATCTACTTTGCTTCA
TTAGCACGCGGGATTGATGATGTTGCCACAATGTACAAGTACAACATCATTTTAGCGAACTCAGATGAAAACAACCAAAA
GGAAGTTCAAGTATTGAATACCTTATTGGCAAAACAAGTAGATGGTTTAATCTACATGGGTCACAGTATCTCAGATGCAA
TCCGTGCTGAATTCGCCCGTTCTAAGACACCAATCGTATTAGCTGGTTCAATCGATCCAGACGAACAAGTCGGTAGTGTT
AATATTGACTACGTTGCAGCCGTTAAGGACGCAACTTTGAAGTTAATCAAGAACGGTAACGAAAAAGTCGCCTTCATCTG
TGGCAACTTAGATTTTCCAATCAACAGCAAATATCGTTTACGTGGCTATAAAGATGCCTTGAACGAAGCTGGTATTCCTT
ATGACGAAAGCTTAATTTTCGAAACAGAATACAGTTACAGTGCTGGTGAAGCCTTATTCGGTAAGGTTCAAGCAACTGGC
GCAACTGCTGCTGTTGTCAGTGACGATGAATTAGCCGTAGGTGTTTTAAATGCTGCTGTTGATGCAGGGGTTAATATTCC
AACTGACTTTGAAATTGTGACAAGTAATAACACGAAGTTAACTGAAATGGTTCGTCCTAAGATGACATCAATCTCACAAC
CTTTATATGATATGGGTGCTGTTGGGATGCGTCTGTTAACGAAGATGATGAACAAAGAAGAAATCGATGATAAGACAATC
CTATTGCCATATAGTATTGTTGATCGTCAATCAACTAAATAA

Domains

Predicted by InterProScan.

• Periplasmic binding protein-like domain (Peripla_BP_3) (175-332)

• Bacterial regulatory proteins, lacI family (LacI) (7-52)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ccpA	Streptococcus pneumoniae D39	62.31	98.799	0.616
ccpA	Streptococcus gordonii str. Challis substr. CH1	60.486	98.799	0.598
ccpA	Lactococcus lactis subsp. lactis strain DGCC12653	56.456	100	0.565