Detailed information NTG0216366

Bioinformatically predicted

Overview

• Name: comGF
• Type: Machinery gene
• Locus tag: CWQ21_RS01335
• Genome accession: NZ_CP025028
• Coordinates: 216700..217161 (+)
• Length: 153 a.a.
• NCBI ID: WP_001874812.1
• Uniprot ID: -
• Organism: Streptococcus agalactiae strain SGEHI2015-95
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 211700..222161

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
CWQ21_RS01300 (CWQ21_01300)	-	213315..213680 (+)	366	WP_000285373.1	DUF1033 family protein	-
CWQ21_RS01310 (CWQ21_01310)	comGA	213853..214824 (+)	972	WP_000250805.1	competence type IV pilus ATPase ComGA	Machinery gene
CWQ21_RS01315 (CWQ21_01315)	comGB	214718..215761 (+)	1044	WP_223295889.1	competence type IV pilus assembly protein ComGB	Machinery gene
CWQ21_RS01320 (CWQ21_01320)	comGC/cglC	215758..216087 (+)	330	WP_000793380.1	competence type IV pilus major pilin ComGC	Machinery gene
CWQ21_RS01325 (CWQ21_01325)	comGD	216062..216475 (+)	414	WP_000244261.1	competence type IV pilus minor pilin ComGD	Machinery gene
CWQ21_RS01330 (CWQ21_01330)	comGE	216447..216746 (+)	300	WP_000234804.1	competence type IV pilus minor pilin ComGE	Machinery gene
CWQ21_RS01335 (CWQ21_01335)	comGF	216700..217161 (+)	462	WP_001874812.1	competence type IV pilus minor pilin ComGF	Machinery gene
CWQ21_RS01340 (CWQ21_01340)	comGG	217139..217510 (+)	372	WP_000601104.1	competence type IV pilus minor pilin ComGG	Machinery gene
CWQ21_RS01345 (CWQ21_01345)	comGH	217625..218599 (+)	975	WP_001008574.1	N-6 DNA methylase	Machinery gene
CWQ21_RS01350 (CWQ21_01350)	-	218631..219824 (+)	1194	WP_000047534.1	acetate kinase	-
CWQ21_RS01355 (CWQ21_01355)	-	219976..220182 (+)	207	WP_000798241.1	helix-turn-helix transcriptional regulator	-
CWQ21_RS01360 (CWQ21_01360)	-	220241..220378 (+)	138	WP_001865900.1	hypothetical protein	-
CWQ21_RS01365 (CWQ21_01365)	-	220419..220874 (+)	456	WP_000905673.1	hypothetical protein	-
CWQ21_RS01370 (CWQ21_01370)	-	220943..221608 (+)	666	WP_000008113.1	type II CAAX endopeptidase family protein	-

Sequence

Protein

• Length: 153 a.a.
• Molecular weight: 17875.89 Da
• Isoelectric Point: 9.8392

>NTDB_id=216366 CWQ21_RS01335 WP_001874812.1 216700..217161(+) (comGF) [Streptococcus agalactiae strain SGEHI2015-95]
MKIIRKFCTYQKLRVKAFTLLECLVALVTITGALLVYQGLTKLLAQQIVVMSSSSQSEWVLLTQQLNAEFEGAHLEYLRQ
NKLYLRKQDKIVTFGKSNKDDFRKTGYDGRGYQPMVYGLDNCQMSQTKSMVKLVFYFKDGLKRTFYYDFKEET

Nucleotide

• Length: 462 bp

>NTDB_id=216366 CWQ21_RS01335 WP_001874812.1 216700..217161(+) (comGF) [Streptococcus agalactiae strain SGEHI2015-95]
TTGAAGATAATAAGGAAATTTTGCACGTATCAAAAGTTAAGGGTTAAAGCATTTACGCTTTTAGAATGTTTGGTAGCATT
GGTTACAATCACAGGAGCTTTACTAGTTTATCAAGGACTGACAAAATTGTTGGCTCAACAGATAGTAGTGATGTCTTCTT
CCAGTCAGTCTGAATGGGTGTTATTAACTCAGCAACTAAATGCAGAATTTGAAGGCGCTCATCTGGAATATTTAAGACAG
AACAAACTTTATTTACGTAAGCAAGATAAGATTGTAACCTTTGGCAAATCTAATAAAGATGATTTCCGTAAGACAGGTTA
TGATGGTCGAGGTTATCAACCAATGGTTTATGGGTTAGACAATTGTCAAATGAGTCAGACCAAAAGTATGGTAAAACTTG
TTTTTTATTTTAAGGACGGGTTAAAAAGGACATTTTACTATGATTTTAAAGAAGAAACTTAA

Domains

Predicted by InterProScan.

• Putative Competence protein ComGF (ComGF) (49-142)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGF	Streptococcus mutans UA159	47.887	92.81	0.444
comGF	Streptococcus mutans UA140	47.887	92.81	0.444
comGF/cglF	Streptococcus pneumoniae Rx1	43.165	90.85	0.392
comGF/cglF	Streptococcus pneumoniae D39	43.165	90.85	0.392
comGF/cglF	Streptococcus pneumoniae R6	43.165	90.85	0.392
comGF/cglF	Streptococcus pneumoniae TIGR4	43.165	90.85	0.392
comGF/cglF	Streptococcus mitis SK321	44.03	87.582	0.386
comGF/cglF	Streptococcus mitis NCTC 12261	43.284	87.582	0.379
comGF	Lactococcus lactis subsp. cremoris KW2	40.714	91.503	0.373