Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   BWR56_RS04930 Genome accession   NZ_CP019562
Coordinates   1020320..1021129 (-) Length   269 a.a.
NCBI ID   WP_049505844.1    Uniprot ID   -
Organism   Streptococcus oralis strain S.MIT/ORALIS-351     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1015320..1026129
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BWR56_RS04910 (BWR56_0974) - 1015705..1016859 (-) 1155 WP_049505841.1 DUF4352 domain-containing protein -
  BWR56_RS04915 (BWR56_0975) - 1017244..1018962 (+) 1719 WP_076984560.1 phospho-sugar mutase -
  BWR56_RS04920 (BWR56_0976) - 1019074..1019421 (+) 348 WP_076984561.1 PedC/BrcD family bacteriocin maturation disulfide isomerase -
  BWR56_RS04925 (BWR56_0977) - 1019459..1020232 (-) 774 WP_076984562.1 potassium channel family protein -
  BWR56_RS04930 (BWR56_0978) vicX 1020320..1021129 (-) 810 WP_049505844.1 MBL fold metallo-hydrolase Regulator
  BWR56_RS04935 (BWR56_0979) micB 1021131..1022480 (-) 1350 WP_049505845.1 cell wall metabolism sensor histidine kinase VicK Regulator
  BWR56_RS04940 (BWR56_0980) micA 1022473..1023180 (-) 708 WP_049505846.1 response regulator YycF Regulator
  BWR56_RS04945 (BWR56_0981) mutY 1023237..1024415 (-) 1179 WP_049505847.1 A/G-specific adenine glycosylase -
  BWR56_RS04950 (BWR56_0982) pta 1024498..1025472 (-) 975 WP_076984563.1 phosphate acetyltransferase -

Sequence

Protein


Download         Length: 269 a.a.        Molecular weight: 29905.90 Da        Isoelectric Point: 6.3420

>NTDB_id=216322 BWR56_RS04930 WP_049505844.1 1020320..1021129(-) (vicX) [Streptococcus oralis strain S.MIT/ORALIS-351]
MSEIGFKYSILASGSSGNSFYLETPKKKILVDAGLSGKKITSLLSEINRKPEDLDAILITHEHSDHIHGVGVLARKYGMD
LYANEKTWQAMENSKYLGKVDSSQKHIFEMGKTKTFGDIDIESFGVSHDAAAPQFYRFMKDDKSFVMLTDTGYVSDRMAG
IVENADGYLIESNHDVEILRAGSYAWRLKQRILSDLGHLSNEDGAEAMIRAMGNRTKKIYLGHLSKENNIKELAHMTMVN
QLAQADLGVGVDFKVYNTSPDTATPLTDI

Nucleotide


Download         Length: 810 bp        

>NTDB_id=216322 BWR56_RS04930 WP_049505844.1 1020320..1021129(-) (vicX) [Streptococcus oralis strain S.MIT/ORALIS-351]
ATGAGTGAAATAGGCTTTAAATACAGTATTTTAGCATCAGGTTCCAGTGGAAATTCCTTTTATCTGGAAACCCCAAAAAA
GAAAATTTTAGTGGATGCAGGCTTGTCTGGTAAGAAAATTACCAGTCTTTTGAGTGAAATCAATCGCAAACCTGAAGATT
TGGATGCGATTTTGATTACGCATGAGCATTCAGACCATATTCATGGAGTCGGTGTCTTGGCTCGCAAATATGGCATGGAC
CTTTACGCCAATGAAAAGACCTGGCAGGCTATGGAAAATAGTAAGTATCTTGGCAAGGTAGACTCTTCGCAGAAGCATAT
CTTTGAAATGGGCAAAACCAAAACCTTTGGCGATATCGACATTGAGAGTTTTGGAGTCAGCCATGATGCGGCAGCACCAC
AGTTTTACCGATTTATGAAAGACGACAAGAGTTTTGTCATGCTGACTGACACAGGTTATGTTAGTGATCGTATGGCAGGA
ATTGTTGAGAATGCTGACGGTTATCTCATCGAGTCCAACCACGACGTGGAAATCTTACGAGCAGGTTCTTATGCTTGGCG
TCTCAAACAGCGAATCCTGTCGGATCTCGGTCACCTCTCTAACGAAGACGGTGCTGAGGCCATGATTCGTGCCATGGGAA
ATCGCACAAAGAAAATCTATCTTGGGCATTTATCCAAAGAAAACAATATCAAGGAGCTGGCTCATATGACCATGGTCAAT
CAGCTAGCCCAAGCTGATCTGGGAGTCGGAGTAGACTTTAAAGTTTATAATACCTCACCAGATACTGCAACACCATTGAC
AGATATATAA

Domains

Predicted by InterproScan.

Metallo-beta-lactamase superfamily (Lactamase_B)

(15-223)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

76.952

100

0.77

Multiple sequence alignment