Detailed information    

insolico Bioinformatically predicted

Overview

Name   comM   Type   Regulator
Locus tag   BWR56_RS01255 Genome accession   NZ_CP019562
Coordinates   246904..247527 (+) Length   207 a.a.
NCBI ID   WP_076984885.1    Uniprot ID   -
Organism   Streptococcus oralis strain S.MIT/ORALIS-351     
Function   fratricide immunity (predicted from homology)   
Competence regulation

Genomic Context

Location: 241904..252527
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BWR56_RS01245 (BWR56_0242) rpoC 242574..246239 (+) 3666 WP_000228753.1 DNA-directed RNA polymerase subunit beta' -
  BWR56_RS01250 (BWR56_0243) ndk 246350..246769 (+) 420 WP_076984297.1 nucleoside-diphosphate kinase -
  BWR56_RS01255 (BWR56_0244) comM 246904..247527 (+) 624 WP_076984885.1 hypothetical protein Regulator
  BWR56_RS01260 (BWR56_0245) tsaE 247611..248054 (+) 444 WP_049505418.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -
  BWR56_RS01265 (BWR56_0246) - 248044..248565 (+) 522 WP_049505417.1 GNAT family N-acetyltransferase -
  BWR56_RS01270 (BWR56_0247) brpA 248570..249610 (+) 1041 WP_049505416.1 biofilm formation/cell division transcriptional regulator BrpA -
  BWR56_RS01275 (BWR56_0248) cinA 249682..250938 (+) 1257 WP_049505415.1 competence/damage-inducible protein A Machinery gene
  BWR56_RS01280 (BWR56_0249) recA 250993..252141 (+) 1149 WP_001085515.1 recombinase RecA Machinery gene

Sequence

Protein


Download         Length: 207 a.a.        Molecular weight: 23704.65 Da        Isoelectric Point: 9.2521

>NTDB_id=216299 BWR56_RS01255 WP_076984885.1 246904..247527(+) (comM) [Streptococcus oralis strain S.MIT/ORALIS-351]
MVKSIRLLLLIAVVQISFSSCLLWKETFLSLKQTNAYFLILIVGFSVLCAGINYFHTADQSRHSILHVQKKVSLVYCLLL
VVNLLATCLVLSESIQTTSKLQQELVDLFLPSFFFLLGVDLLIFLPFDKIFRDIENHLNKKKTVVISVLATMVFLRNPLV
ISSILLYVSVGFLCARFLFPKCIQREISFYGHLIRDILFVFSIVVFF

Nucleotide


Download         Length: 624 bp        

>NTDB_id=216299 BWR56_RS01255 WP_076984885.1 246904..247527(+) (comM) [Streptococcus oralis strain S.MIT/ORALIS-351]
ATGGTAAAATCAATTCGCCTATTGTTGTTGATTGCAGTCGTCCAGATTAGTTTTTCTAGTTGTCTATTATGGAAAGAAAC
CTTTTTATCTTTAAAACAGACCAATGCTTATTTTTTGATTTTGATAGTAGGATTTTCTGTTCTTTGTGCTGGGATAAATT
ATTTCCATACAGCAGACCAGTCTAGGCACAGTATTTTACATGTTCAAAAGAAAGTGAGTCTGGTTTATTGCCTCCTTTTA
GTAGTCAATCTTTTGGCAACCTGTCTGGTTCTCTCAGAAAGCATCCAAACTACTAGCAAATTGCAACAAGAATTGGTTGA
CCTCTTTTTACCCTCCTTCTTTTTCTTGCTAGGAGTAGATCTATTGATTTTCTTACCTTTTGATAAAATTTTTCGCGATA
TAGAAAATCACCTAAATAAAAAGAAAACAGTCGTCATTTCCGTTCTAGCTACGATGGTTTTCTTGAGGAATCCCTTAGTG
ATTTCCTCGATTCTCCTTTATGTCAGTGTTGGTTTTCTATGCGCACGTTTCCTTTTTCCAAAATGTATTCAAAGGGAAAT
CTCCTTTTATGGGCACCTGATTCGGGATATCCTGTTTGTTTTTTCAATAGTTGTATTCTTTTAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comM Streptococcus pneumoniae D39

50.485

99.517

0.502
  comM Streptococcus pneumoniae R6

50.485

99.517

0.502
  comM Streptococcus pneumoniae TIGR4

50.485

99.517

0.502
  comM Streptococcus mitis NCTC 12261

40.102

95.169

0.382
  comM Streptococcus mitis SK321

40.102

95.169

0.382

Multiple sequence alignment