Detailed information    

insolico Bioinformatically predicted

Overview

Name   ccpA   Type   Regulator
Locus tag   BZG42_RS02885 Genome accession   NZ_CP019557
Coordinates   579945..580949 (+) Length   334 a.a.
NCBI ID   WP_155995666.1    Uniprot ID   -
Organism   Streptococcus sp. DAT741     
Function   regulate comCDE transcription and transformation (predicted from homology)   
Competence regulation

Genomic Context

Location: 574945..585949
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BZG42_RS02875 (BZG42_02870) - 575054..578077 (+) 3024 WP_159780080.1 MucBP domain-containing protein -
  BZG42_RS02880 (BZG42_02875) - 578650..579735 (-) 1086 WP_155961915.1 Xaa-Pro peptidase family protein -
  BZG42_RS02885 (BZG42_02880) ccpA 579945..580949 (+) 1005 WP_155995666.1 catabolite control protein A Regulator
  BZG42_RS02890 (BZG42_02885) - 581044..582078 (+) 1035 WP_120171452.1 glycosyltransferase family 4 protein -
  BZG42_RS02895 (BZG42_02890) - 582091..583404 (+) 1314 WP_024532090.1 glycosyltransferase family 4 protein -
  BZG42_RS02900 (BZG42_02895) - 583770..584087 (+) 318 WP_120171453.1 MazG-like protein -

Sequence

Protein


Download         Length: 334 a.a.        Molecular weight: 36857.10 Da        Isoelectric Point: 5.5207

>NTDB_id=216212 BZG42_RS02885 WP_155995666.1 579945..580949(+) (ccpA) [Streptococcus sp. DAT741]
MLNTDDTVTIYDVAREAGVSMATVSRVVNGNKNVKENTRKKVLEVIDRLDYRPNAVARGLASKKTTTVGVVIPNIANAYF
ATLAKGIDDIADMYKYNIVLANSDENDEKEINVVNTLFSKQVDGIIFMGYHLTDKIRAEFSRSRTPIVLAGTVDLEHQLP
SVNIDYAVASTDAVNLLAKNNKKIAFVSGPLVDDINGKVRFAGYKQGLKENGIEFNEGLVFESKYKYEEGYALAERVLNA
GATAAYVAEDEIAAGLLNGISDMGIKVPEDFEIITSDDSLVTKFTRPNLISINQPLYDIGAIAMRMLTKIMHKEELENRE
VILNHGIKVRKSTK

Nucleotide


Download         Length: 1005 bp        

>NTDB_id=216212 BZG42_RS02885 WP_155995666.1 579945..580949(+) (ccpA) [Streptococcus sp. DAT741]
ATGTTAAACACTGACGATACGGTAACGATTTATGATGTTGCCCGCGAAGCTGGTGTATCCATGGCGACTGTGTCGCGCGT
GGTAAACGGAAATAAGAATGTAAAGGAAAACACCCGTAAAAAGGTATTAGAAGTTATTGACCGTTTAGATTATCGTCCAA
ATGCTGTTGCGCGTGGTTTGGCCAGCAAGAAGACGACCACTGTTGGGGTCGTGATTCCAAATATTGCAAATGCCTATTTT
GCGACTCTGGCTAAAGGTATTGATGATATTGCGGATATGTATAAGTACAATATTGTCCTTGCTAACAGTGATGAGAATGA
CGAAAAAGAAATCAACGTGGTCAATACTTTATTTTCAAAACAGGTGGACGGCATCATTTTCATGGGCTACCACTTGACAG
ACAAGATTCGTGCGGAATTCTCCCGTTCACGAACTCCGATTGTCCTAGCTGGTACCGTGGATTTGGAGCACCAGTTGCCA
AGTGTCAATATTGACTATGCTGTTGCTAGTACGGATGCAGTGAACCTTCTTGCAAAGAATAATAAAAAAATCGCCTTTGT
ATCTGGTCCACTCGTTGATGACATCAATGGAAAAGTTCGTTTTGCTGGTTATAAGCAAGGACTAAAAGAAAATGGGATTG
AGTTCAATGAAGGTTTAGTCTTTGAATCTAAGTATAAGTACGAAGAAGGCTATGCTCTTGCAGAGCGTGTCTTAAATGCT
GGGGCTACCGCTGCCTATGTTGCCGAGGATGAAATTGCAGCAGGTCTATTGAACGGCATCAGTGATATGGGAATCAAAGT
TCCTGAAGATTTTGAAATCATCACCAGTGATGACTCTCTCGTTACTAAATTTACCCGTCCAAACCTGATATCTATCAATC
AACCACTTTATGATATTGGTGCTATTGCTATGCGCATGCTGACAAAAATCATGCACAAGGAAGAGTTGGAAAATCGTGAA
GTGATTTTGAATCACGGTATAAAGGTTCGCAAATCAACGAAATAA

Domains

Predicted by InterproScan.

Periplasmic binding protein-like domain (Peripla_BP_3)

(176-333)

Bacterial regulatory proteins, lacI family (LacI)

(9-54)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ccpA Streptococcus pneumoniae D39

79.58

99.701

0.793
  ccpA Streptococcus gordonii str. Challis substr. CH1

79.279

99.701

0.79
  ccpA Lactococcus lactis subsp. lactis strain DGCC12653

58.61

99.102

0.581

Multiple sequence alignment