Detailed information
Bioinformatically predicted
Overview
| Name | comYH | Type | Machinery gene |
| Locus tag | BZG42_RS00825 | Genome accession | NZ_CP019557 |
| Coordinates | 124306..125259 (+) | Length | 317 a.a. |
| NCBI ID | WP_155995574.1 | Uniprot ID | - |
| Organism | Streptococcus sp. DAT741 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 119306..130259
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BZG42_RS00785 (BZG42_00760) | - | 119533..120483 (-) | 951 | WP_024532257.1 | S66 peptidase family protein | - |
| BZG42_RS00790 (BZG42_00765) | comYA | 120644..121594 (+) | 951 | WP_155962599.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| BZG42_RS00795 (BZG42_00770) | comYB | 121515..122546 (+) | 1032 | WP_155995580.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| BZG42_RS00800 (BZG42_00775) | comYC | 122543..122824 (+) | 282 | WP_024532254.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| BZG42_RS00805 (BZG42_00780) | comGD | 122811..123224 (+) | 414 | WP_155995578.1 | competence type IV pilus minor pilin ComGD | - |
| BZG42_RS00810 (BZG42_00785) | comYE | 123196..123489 (+) | 294 | WP_155995576.1 | competence type IV pilus minor pilin ComGE | Machinery gene |
| BZG42_RS00815 (BZG42_00790) | comGF/cglF | 123476..123910 (+) | 435 | WP_024532251.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| BZG42_RS00820 (BZG42_00795) | comGG | 123888..124301 (+) | 414 | WP_120171207.1 | competence type IV pilus minor pilin ComGG | - |
| BZG42_RS00825 (BZG42_00800) | comYH | 124306..125259 (+) | 954 | WP_155995574.1 | class I SAM-dependent methyltransferase | Machinery gene |
| BZG42_RS00830 (BZG42_00805) | - | 125309..126496 (+) | 1188 | WP_024532248.1 | acetate kinase | - |
| BZG42_RS00835 (BZG42_00810) | - | 126801..127355 (+) | 555 | WP_024532247.1 | folate family ECF transporter S component | - |
| BZG42_RS00840 (BZG42_00815) | - | 127454..128710 (+) | 1257 | WP_155972328.1 | folylpolyglutamate synthase/dihydrofolate synthase family protein | - |
| BZG42_RS00845 (BZG42_00820) | pepA | 129024..130085 (-) | 1062 | WP_155995572.1 | glutamyl aminopeptidase | - |
Sequence
Protein
Download Length: 317 a.a. Molecular weight: 35777.85 Da Isoelectric Point: 4.3462
>NTDB_id=216203 BZG42_RS00825 WP_155995574.1 124306..125259(+) (comYH) [Streptococcus sp. DAT741]
MNFEKIEQVYDLLLENVQTIQNQLGTNIYDAMIEQNAAYVAGQHEIDLVARNNQTVKGLDLTKEEWRRSYQFLLIKANQT
EPLQYNHQFTPDSIGFILSFLVDQLISTPQVTILEIGSGTGNLAQTILNASQKKLDYLGIEVDDLLIDLSASIADVMEAE
ISFAQGDAVRPQILKESQVILSDLPIGYYPDDQIASRYQVASQTEHTYAHHLLMEQSLKYLEKDGFAILLAPNDLLTSPQ
SDLLKIWLQEQANIVAMIALPPTLFGKAAMAKSIFILQKQTARALTPFVYPLQSLQDPETVQQFMINFKNWKQENAI
MNFEKIEQVYDLLLENVQTIQNQLGTNIYDAMIEQNAAYVAGQHEIDLVARNNQTVKGLDLTKEEWRRSYQFLLIKANQT
EPLQYNHQFTPDSIGFILSFLVDQLISTPQVTILEIGSGTGNLAQTILNASQKKLDYLGIEVDDLLIDLSASIADVMEAE
ISFAQGDAVRPQILKESQVILSDLPIGYYPDDQIASRYQVASQTEHTYAHHLLMEQSLKYLEKDGFAILLAPNDLLTSPQ
SDLLKIWLQEQANIVAMIALPPTLFGKAAMAKSIFILQKQTARALTPFVYPLQSLQDPETVQQFMINFKNWKQENAI
Nucleotide
Download Length: 954 bp
>NTDB_id=216203 BZG42_RS00825 WP_155995574.1 124306..125259(+) (comYH) [Streptococcus sp. DAT741]
ATGAATTTTGAAAAGATTGAACAGGTCTATGACCTGCTATTAGAAAATGTACAGACCATCCAAAATCAGTTGGGTACGAA
TATTTATGATGCCATGATTGAGCAGAATGCAGCCTACGTAGCTGGCCAGCATGAGATTGATTTGGTTGCAAGGAACAACC
AGACTGTGAAAGGTTTAGACTTGACCAAGGAAGAATGGCGTCGTTCCTATCAATTTCTCTTAATCAAGGCCAATCAGACG
GAACCTCTTCAGTATAATCATCAATTTACACCAGATTCAATAGGCTTTATCTTGTCATTTTTAGTGGATCAGCTTATTTC
AACCCCACAAGTGACAATCCTAGAAATCGGATCAGGGACAGGAAATTTAGCCCAGACTATTCTCAATGCTAGCCAGAAAA
AACTAGATTATCTTGGTATTGAAGTGGATGACCTTTTGATCGACTTATCAGCCAGTATCGCAGATGTCATGGAGGCAGAA
ATTAGCTTTGCTCAAGGTGATGCAGTGCGTCCGCAGATTTTGAAGGAAAGCCAAGTCATTTTAAGTGATTTGCCGATTGG
CTACTATCCAGATGACCAGATTGCTAGTCGCTATCAGGTAGCCAGTCAGACGGAGCATACCTACGCTCACCATTTGCTCA
TGGAACAATCTCTCAAGTATCTTGAGAAAGATGGATTTGCCATTCTCTTGGCTCCCAATGACCTTTTGACTAGTCCACAA
AGCGACCTATTGAAAATCTGGCTACAGGAGCAGGCCAATATTGTAGCTATGATTGCTCTTCCGCCAACCTTATTTGGAAA
AGCTGCCATGGCTAAGTCTATTTTTATTCTACAAAAACAAACAGCTAGAGCATTGACTCCCTTTGTTTACCCTTTGCAAA
GTCTCCAAGACCCAGAGACAGTTCAACAGTTTATGATCAATTTTAAAAATTGGAAGCAAGAAAATGCAATTTGA
ATGAATTTTGAAAAGATTGAACAGGTCTATGACCTGCTATTAGAAAATGTACAGACCATCCAAAATCAGTTGGGTACGAA
TATTTATGATGCCATGATTGAGCAGAATGCAGCCTACGTAGCTGGCCAGCATGAGATTGATTTGGTTGCAAGGAACAACC
AGACTGTGAAAGGTTTAGACTTGACCAAGGAAGAATGGCGTCGTTCCTATCAATTTCTCTTAATCAAGGCCAATCAGACG
GAACCTCTTCAGTATAATCATCAATTTACACCAGATTCAATAGGCTTTATCTTGTCATTTTTAGTGGATCAGCTTATTTC
AACCCCACAAGTGACAATCCTAGAAATCGGATCAGGGACAGGAAATTTAGCCCAGACTATTCTCAATGCTAGCCAGAAAA
AACTAGATTATCTTGGTATTGAAGTGGATGACCTTTTGATCGACTTATCAGCCAGTATCGCAGATGTCATGGAGGCAGAA
ATTAGCTTTGCTCAAGGTGATGCAGTGCGTCCGCAGATTTTGAAGGAAAGCCAAGTCATTTTAAGTGATTTGCCGATTGG
CTACTATCCAGATGACCAGATTGCTAGTCGCTATCAGGTAGCCAGTCAGACGGAGCATACCTACGCTCACCATTTGCTCA
TGGAACAATCTCTCAAGTATCTTGAGAAAGATGGATTTGCCATTCTCTTGGCTCCCAATGACCTTTTGACTAGTCCACAA
AGCGACCTATTGAAAATCTGGCTACAGGAGCAGGCCAATATTGTAGCTATGATTGCTCTTCCGCCAACCTTATTTGGAAA
AGCTGCCATGGCTAAGTCTATTTTTATTCTACAAAAACAAACAGCTAGAGCATTGACTCCCTTTGTTTACCCTTTGCAAA
GTCTCCAAGACCCAGAGACAGTTCAACAGTTTATGATCAATTTTAAAAATTGGAAGCAAGAAAATGCAATTTGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comYH | Streptococcus mutans UA140 |
61.076 |
99.685 |
0.609 |
| comYH | Streptococcus mutans UA159 |
60.759 |
99.685 |
0.606 |