Detailed information
Bioinformatically predicted
Overview
| Name | qstR | Type | Regulator |
| Locus tag | FORC54_RS14540 | Genome accession | NZ_CP019121 |
| Coordinates | 2876735..2877382 (+) | Length | 215 a.a. |
| NCBI ID | WP_017420064.1 | Uniprot ID | A0A2S3SZL1 |
| Organism | Vibrio vulnificus strain FORC_054 | ||
| Function | promote expression of competence genes (predicted from homology) Competence regulation |
||
Genomic Context
Location: 2871735..2882382
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FORC54_RS14525 (FORC54_2625) | - | 2872273..2873733 (-) | 1461 | WP_101958973.1 | MSHA biogenesis protein MshI | - |
| FORC54_RS14530 (FORC54_2626) | csrD | 2873746..2875743 (-) | 1998 | WP_038964215.1 | RNase E specificity factor CsrD | - |
| FORC54_RS14535 (FORC54_2627) | ssb | 2875896..2876435 (-) | 540 | WP_011079389.1 | single-stranded DNA-binding protein | Machinery gene |
| FORC54_RS14540 (FORC54_2628) | qstR | 2876735..2877382 (+) | 648 | WP_017420064.1 | response regulator transcription factor | Regulator |
| FORC54_RS14545 (FORC54_2629) | galU | 2877568..2878440 (+) | 873 | WP_017420065.1 | UTP--glucose-1-phosphate uridylyltransferase GalU | - |
| FORC54_RS14550 (FORC54_2630) | uvrA | 2878583..2881405 (+) | 2823 | WP_026050227.1 | excinuclease ABC subunit UvrA | - |
Sequence
Protein
Download Length: 215 a.a. Molecular weight: 24730.69 Da Isoelectric Point: 9.8565
>NTDB_id=213345 FORC54_RS14540 WP_017420064.1 2876735..2877382(+) (qstR) [Vibrio vulnificus strain FORC_054]
MRKSSYARKPFFISLQNEQTPEFVTVLAKQIQMEIPVITPATLMQADPNHRNRILLIDHQQHKVLLREIKNLPLIWKGFE
TVLCNVPNRLTTEELIGFGQCKAIFYRDTTIADMTKGLNSVINGKSWLPRDVSAQLIHYYRNMVCSHTSPVNVDLTMREI
QVLRCVQSGKSNSQIAEDLFISEFTVKSHLYQTFRKLSVKNRVQAAAWADQNLIS
MRKSSYARKPFFISLQNEQTPEFVTVLAKQIQMEIPVITPATLMQADPNHRNRILLIDHQQHKVLLREIKNLPLIWKGFE
TVLCNVPNRLTTEELIGFGQCKAIFYRDTTIADMTKGLNSVINGKSWLPRDVSAQLIHYYRNMVCSHTSPVNVDLTMREI
QVLRCVQSGKSNSQIAEDLFISEFTVKSHLYQTFRKLSVKNRVQAAAWADQNLIS
Nucleotide
Download Length: 648 bp
>NTDB_id=213345 FORC54_RS14540 WP_017420064.1 2876735..2877382(+) (qstR) [Vibrio vulnificus strain FORC_054]
ATGAGAAAATCTTCTTACGCGCGGAAGCCATTTTTTATCAGTTTGCAAAACGAACAAACTCCTGAGTTCGTCACTGTATT
AGCGAAACAGATTCAAATGGAAATCCCTGTGATTACCCCGGCAACGCTCATGCAAGCCGATCCCAATCATCGTAATCGCA
TCTTATTGATTGATCATCAGCAACATAAGGTGCTGCTGAGAGAGATTAAAAACCTACCGCTAATATGGAAAGGGTTTGAA
ACGGTCCTGTGTAATGTACCTAACCGATTGACGACTGAGGAACTGATTGGCTTTGGCCAGTGCAAAGCGATCTTCTACCG
AGACACAACCATTGCAGACATGACCAAAGGACTAAATTCGGTGATTAATGGTAAGAGCTGGCTGCCACGCGACGTCAGCG
CACAACTCATCCACTACTATCGAAATATGGTTTGCTCACACACTTCACCAGTGAATGTGGATCTCACGATGAGAGAAATT
CAAGTGCTACGCTGCGTGCAGTCTGGCAAATCAAATTCTCAAATCGCCGAAGATCTTTTCATTAGCGAGTTCACCGTAAA
GTCGCATCTCTATCAAACCTTTAGAAAACTTTCCGTGAAGAATCGTGTCCAAGCTGCCGCGTGGGCTGACCAAAATTTGA
TCTCATAA
ATGAGAAAATCTTCTTACGCGCGGAAGCCATTTTTTATCAGTTTGCAAAACGAACAAACTCCTGAGTTCGTCACTGTATT
AGCGAAACAGATTCAAATGGAAATCCCTGTGATTACCCCGGCAACGCTCATGCAAGCCGATCCCAATCATCGTAATCGCA
TCTTATTGATTGATCATCAGCAACATAAGGTGCTGCTGAGAGAGATTAAAAACCTACCGCTAATATGGAAAGGGTTTGAA
ACGGTCCTGTGTAATGTACCTAACCGATTGACGACTGAGGAACTGATTGGCTTTGGCCAGTGCAAAGCGATCTTCTACCG
AGACACAACCATTGCAGACATGACCAAAGGACTAAATTCGGTGATTAATGGTAAGAGCTGGCTGCCACGCGACGTCAGCG
CACAACTCATCCACTACTATCGAAATATGGTTTGCTCACACACTTCACCAGTGAATGTGGATCTCACGATGAGAGAAATT
CAAGTGCTACGCTGCGTGCAGTCTGGCAAATCAAATTCTCAAATCGCCGAAGATCTTTTCATTAGCGAGTTCACCGTAAA
GTCGCATCTCTATCAAACCTTTAGAAAACTTTCCGTGAAGAATCGTGTCCAAGCTGCCGCGTGGGCTGACCAAAATTTGA
TCTCATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| qstR | Vibrio parahaemolyticus RIMD 2210633 |
60.93 |
100 |
0.609 |
| qstR | Vibrio campbellii strain DS40M4 |
60.93 |
100 |
0.609 |
| qstR | Vibrio cholerae strain A1552 |
46.729 |
99.535 |
0.465 |