Detailed information    

insolico Bioinformatically predicted

Overview

Name   comL/pilP   Type   Machinery gene
Locus tag   NP7_RS02755 Genome accession   NZ_CP024443
Coordinates   607986..608519 (+) Length   177 a.a.
NCBI ID   WP_100269607.1    Uniprot ID   -
Organism   Moraxella osloensis strain NP7     
Function   assembly of type IV pilus (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 602986..613519
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NP7_RS02740 (NP7_02735) pilM 605512..606564 (+) 1053 WP_100269605.1 pilus assembly protein PilM Machinery gene
  NP7_RS02745 (NP7_02740) pilN 606564..607235 (+) 672 WP_100269606.1 PilN domain-containing protein Machinery gene
  NP7_RS02750 (NP7_02745) comO/pilO 607238..607999 (+) 762 WP_199488893.1 type 4a pilus biogenesis protein PilO Machinery gene
  NP7_RS02755 (NP7_02750) comL/pilP 607986..608519 (+) 534 WP_100269607.1 pilus assembly protein PilP Machinery gene
  NP7_RS02760 (NP7_02755) pilQ 608537..610897 (+) 2361 WP_100269608.1 type IV pilus secretin family protein Machinery gene
  NP7_RS02765 (NP7_02760) - 611006..611542 (+) 537 WP_100269609.1 shikimate kinase -
  NP7_RS02770 (NP7_02765) aroB 611611..612708 (+) 1098 WP_100269610.1 3-dehydroquinate synthase -

Sequence

Protein


Download         Length: 177 a.a.        Molecular weight: 19552.60 Da        Isoelectric Point: 6.3639

>NTDB_id=212874 NP7_RS02755 WP_100269607.1 607986..608519(+) (comL/pilP) [Moraxella osloensis strain NP7]
MAINKKQLTICLALLALLSGCTDRVGLAEQQMQDIRQQPAQPVKPPPTPEMVQEFNYSASQLRSPFMPPSLMLQANQVQQ
MQGVRPDVTRLKEPLEQFELNELTYKGRMVSSSGEVYGLVQRPDGGIASVKVGNYMGKNEGRIVEITPTQINLIEIIPDS
RVGYVEKPNSIVAAVSQ

Nucleotide


Download         Length: 534 bp        

>NTDB_id=212874 NP7_RS02755 WP_100269607.1 607986..608519(+) (comL/pilP) [Moraxella osloensis strain NP7]
ATGGCGATAAATAAAAAACAGCTTACTATTTGCTTAGCGCTATTAGCCTTATTATCTGGCTGTACTGACCGTGTCGGTTT
GGCAGAGCAACAAATGCAGGACATCCGTCAACAGCCCGCGCAACCGGTAAAGCCACCACCGACACCCGAAATGGTACAAG
AGTTTAATTACAGCGCTTCACAGCTACGTAGCCCATTTATGCCGCCAAGTTTAATGCTGCAAGCCAATCAAGTACAGCAA
ATGCAAGGGGTCAGACCCGATGTGACCCGACTCAAAGAACCGCTTGAACAATTTGAGTTGAATGAGCTTACCTATAAAGG
TAGGATGGTGTCATCATCTGGCGAGGTATATGGTCTTGTTCAACGCCCAGATGGGGGCATTGCCAGTGTCAAAGTGGGTA
ATTATATGGGTAAAAATGAGGGGCGTATTGTAGAGATTACGCCAACCCAAATTAACTTAATTGAAATCATACCAGACAGT
CGTGTCGGTTATGTCGAAAAACCAAACTCAATTGTTGCCGCAGTTAGTCAATAA

Domains

Predicted by InterProScan.

Pilus assembly protein, PilP (PilP)

(30-171)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comL/pilP Acinetobacter baylyi ADP1

47.093

97.175

0.458
  pilP Acinetobacter baumannii D1279779

46.746

95.48

0.446

Multiple sequence alignment