Detailed information    

insolico Bioinformatically predicted

Overview


Name   comA/comEC   Type   Machinery gene
Locus tag   BVL33_RS06795 Genome accession   NZ_CP019041
Coordinates   1395304..1397718 (+) Length   804 a.a.
NCBI ID   WP_075696266.1    Uniprot ID   -
Organism   Acinetobacter junii strain 65     
Function   ssDNA transport through the inner membrane (predicted from homology)   
DNA binding and uptake

Genomic Context


Location: 1390304..1402718
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BVL33_RS06770 (BVL33_06770) - 1391330..1391800 (+) 471 WP_004913645.1 YaiI/YqxD family protein -
  BVL33_RS06775 (BVL33_06775) - 1391808..1392695 (+) 888 WP_075696264.1 DMT family transporter -
  BVL33_RS06780 (BVL33_06780) - 1392706..1393278 (-) 573 WP_004952935.1 PilZ domain-containing protein -
  BVL33_RS06785 (BVL33_06785) - 1393304..1394539 (+) 1236 WP_004959849.1 lipoprotein-releasing ABC transporter permease subunit -
  BVL33_RS06790 (BVL33_06790) lolD 1394532..1395218 (+) 687 WP_075696265.1 lipoprotein-releasing ABC transporter ATP-binding protein LolD -
  BVL33_RS06795 (BVL33_06795) comA/comEC 1395304..1397718 (+) 2415 WP_075696266.1 DNA internalization-related competence protein ComEC/Rec2 Machinery gene
  BVL33_RS06800 (BVL33_06800) - 1397726..1398670 (-) 945 WP_075696267.1 lysophospholipid acyltransferase family protein -
  BVL33_RS06805 (BVL33_06805) sppA 1398809..1399831 (+) 1023 WP_075696268.1 signal peptide peptidase SppA -
  BVL33_RS06810 (BVL33_06810) - 1400006..1400797 (+) 792 WP_075696269.1 alpha/beta fold hydrolase -
  BVL33_RS06815 (BVL33_06815) purN 1400849..1401478 (-) 630 WP_171053811.1 phosphoribosylglycinamide formyltransferase -
  BVL33_RS06820 (BVL33_06820) purM 1401475..1402545 (-) 1071 WP_004952948.1 phosphoribosylformylglycinamidine cyclo-ligase -

Sequence


Protein


Download         Length: 804 a.a.        Molecular weight: 92796.27 Da        Isoelectric Point: 8.4705

>NTDB_id=212813 BVL33_RS06795 WP_075696266.1 1395304..1397718(+) (comA/comEC) [Acinetobacter junii strain 65]
MLKIILIGWIVGISAMGRDFEIINSTWWIWCCIATLLFIFYKIKNKGHSPFYKSLLLITAIWAMFCTGYHYADQALEKRL
ELRELKSQPFEAVVYIRKINELTEEGVKQRAVVLNRHDQVVNWLMYVKEKDHQQEAFVLGNYYRVYGTIKPAYSYAVQGV
FDQEKWFLQQNLMSAFLVEQIVPLSQDEVYRLGHLQYLKEQDHFLEKIGLKIEIMRFEFRQMLAHSNLQHKGLLLALLTG
DESLLAKDLKKKFQQLGISHLLAISGPHVLIFAIMLTWGLQRVLQHYFPNLYLWQPRQIILAFPFLFSVMVYVAFVGFEI
PALRTLLTVALASFFVITRQAIQPFQLLIYSACLFLIYDPFSILSAAFWLSYGACFILLRIYQTISTLPKDRIKNRTEDI
KFAIKILIESQWKIFIALMPLVIIFFQQIAWIAPLSNLIAIPILSMLVVPLDIFAACIWLIFPSLGLVLFTLNNMLLSIL
IGLLDVLMSLTPDLQGISYIPLSLFALSVGIFILFMPKGTIPKSWGLVCFLPILFGAKQQKTMLTILDVGQGQSVFLQQA
QHNLMIDTGGSYNEEKFSLGERVIVPFLRQQGIEKLDQMILSHLDQDHSGAFPYIEQVLEITKVYANEKNEKLPFKDNFS
FCHQGQKWNLAQAQVEILSPKMEELSYVQNQQNEYSCVVYIEFEHAKPYRKFLIMGDAGWETEYKLLKQYPDLEVDVIVL
GHHGSKHSSAYDFLATIKPKLAIASAGFENRYGHPSIELQQRLRTLNIPLLTTSQNGSISFEINHANTVISMYRQQRKWL
TRVQ

Nucleotide


Download         Length: 2415 bp        

>NTDB_id=212813 BVL33_RS06795 WP_075696266.1 1395304..1397718(+) (comA/comEC) [Acinetobacter junii strain 65]
ATGTTGAAAATTATATTGATAGGCTGGATTGTGGGTATTTCAGCTATGGGGCGTGATTTTGAAATCATTAATTCCACTTG
GTGGATTTGGTGCTGTATTGCGACTCTTCTATTTATTTTTTATAAAATAAAAAATAAAGGGCATTCCCCATTTTACAAGT
CACTGTTATTGATCACTGCGATTTGGGCAATGTTTTGCACGGGGTATCACTATGCAGATCAAGCTCTAGAAAAAAGACTT
GAATTACGCGAGTTAAAATCGCAACCATTTGAGGCTGTTGTTTATATTCGAAAAATAAATGAACTCACTGAAGAGGGTGT
TAAACAGCGAGCTGTAGTTTTAAATCGACATGATCAAGTAGTGAATTGGTTGATGTACGTAAAAGAGAAAGATCATCAGC
AAGAAGCTTTTGTATTGGGGAACTATTATCGGGTTTACGGAACAATCAAACCCGCATACAGTTATGCTGTTCAGGGTGTT
TTTGATCAAGAAAAATGGTTCTTACAACAAAATTTAATGTCAGCATTTTTAGTCGAACAAATCGTACCTTTAAGTCAAGA
TGAGGTGTATAGGCTTGGTCATTTGCAATATTTGAAGGAGCAAGACCATTTTTTGGAGAAAATAGGTCTTAAGATTGAAA
TAATGCGATTTGAATTTAGGCAAATGCTTGCTCATTCAAATTTACAACACAAAGGATTGTTACTTGCGTTGCTTACAGGT
GATGAAAGTTTATTAGCTAAAGATTTAAAGAAAAAATTTCAGCAACTTGGGATATCGCATTTATTGGCGATCTCTGGTCC
TCATGTGCTGATTTTTGCAATCATGTTGACATGGGGATTACAAAGAGTTTTACAGCATTATTTTCCAAACTTATATCTAT
GGCAACCTCGTCAGATTATTTTGGCTTTTCCATTTTTATTTAGTGTCATGGTTTACGTGGCTTTCGTTGGATTTGAAATT
CCAGCTTTAAGGACGTTGTTGACGGTCGCCCTGGCAAGTTTTTTCGTTATCACGAGGCAAGCGATTCAGCCTTTTCAGTT
ACTAATTTATAGCGCGTGTTTATTTCTGATCTATGATCCATTTAGTATCTTGTCGGCTGCCTTTTGGCTATCTTACGGTG
CATGTTTCATCCTATTGAGAATTTATCAAACGATCAGCACTCTACCAAAAGACAGAATAAAAAATAGAACTGAGGATATA
AAGTTTGCAATCAAAATTTTGATCGAATCACAATGGAAAATTTTTATCGCCTTAATGCCCTTAGTTATCATTTTTTTCCA
ACAAATTGCTTGGATTGCGCCACTTAGTAATCTGATAGCTATTCCGATATTAAGCATGTTGGTTGTACCTTTAGATATTT
TTGCTGCATGTATTTGGCTAATTTTTCCTTCATTAGGTCTAGTTTTATTCACCCTCAATAATATGTTGTTAAGCATACTA
ATCGGATTATTAGATGTTTTGATGTCACTCACACCTGATTTACAAGGTATAAGTTATATCCCATTGTCATTATTCGCTTT
GAGTGTCGGGATTTTTATTTTATTTATGCCGAAAGGAACGATACCTAAATCTTGGGGTTTAGTTTGTTTCTTACCTATTT
TATTCGGTGCAAAACAACAAAAGACTATGCTAACCATTTTAGATGTGGGGCAGGGACAATCTGTATTTTTACAACAAGCT
CAGCATAACCTAATGATAGATACTGGTGGTTCATATAATGAAGAGAAGTTCAGTTTAGGTGAGCGAGTGATTGTTCCATT
TCTTCGACAGCAGGGCATCGAAAAATTAGATCAAATGATTTTATCGCATCTCGATCAAGACCATAGTGGTGCTTTTCCAT
ATATTGAGCAAGTCCTCGAGATCACAAAGGTTTATGCAAATGAGAAAAATGAAAAATTGCCATTTAAAGATAATTTTTCT
TTTTGTCATCAAGGTCAAAAATGGAATTTAGCTCAAGCTCAGGTTGAGATTCTATCTCCAAAAATGGAGGAGCTGAGTTA
TGTTCAAAATCAACAAAATGAATATTCATGTGTTGTGTATATTGAGTTTGAACATGCCAAACCGTATCGCAAATTCTTAA
TTATGGGGGATGCAGGTTGGGAAACAGAATATAAGCTATTAAAGCAATATCCAGACTTAGAGGTAGATGTCATTGTTTTG
GGGCATCATGGAAGCAAACATAGTTCAGCTTATGATTTTTTAGCAACAATTAAACCTAAATTGGCAATCGCTTCCGCAGG
TTTTGAAAATCGTTATGGTCATCCGAGTATTGAATTACAGCAAAGATTGCGAACATTAAATATTCCATTGTTGACGACCA
GCCAAAACGGATCGATCTCCTTTGAAATCAATCATGCAAATACCGTAATTTCCATGTACAGACAACAACGTAAATGGTTA
ACTCGGGTGCAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comA/comEC Acinetobacter baumannii D1279779

53.268

100

0.537

  comA/comEC Acinetobacter baumannii strain A118

53.144

100

0.536

  comA/comEC Acinetobacter baylyi ADP1

49.197

100

0.495


Multiple sequence alignment