Detailed information    

insolico Bioinformatically predicted

Overview


Name   pilN   Type   Machinery gene
Locus tag   BVL33_RS02815 Genome accession   NZ_CP019041
Coordinates   581950..582594 (+) Length   214 a.a.
NCBI ID   WP_004909633.1    Uniprot ID   S7WRY4
Organism   Acinetobacter junii strain 65     
Function   assembly of type IV pilus (predicted from homology)   
DNA binding and uptake

Genomic Context


Location: 576950..587594
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BVL33_RS02800 (BVL33_02800) - 577317..578135 (+) 819 WP_075696024.1 putative RNA methyltransferase -
  BVL33_RS02805 (BVL33_02805) ponA 578150..580729 (-) 2580 WP_075696025.1 penicillin-binding protein PBP1a -
  BVL33_RS02810 (BVL33_02810) pilM 580892..581950 (+) 1059 WP_004951546.1 pilus assembly protein PilM Machinery gene
  BVL33_RS02815 (BVL33_02815) pilN 581950..582594 (+) 645 WP_004909633.1 PilN domain-containing protein Machinery gene
  BVL33_RS02820 (BVL33_02820) pilO 582591..583331 (+) 741 WP_075696026.1 type 4a pilus biogenesis protein PilO Machinery gene
  BVL33_RS02825 (BVL33_02825) pilP 583331..583858 (+) 528 WP_075696027.1 pilus assembly protein PilP Machinery gene
  BVL33_RS02830 (BVL33_02830) pilQ 583920..586055 (+) 2136 WP_167543108.1 type IV pilus secretin PilQ family protein Machinery gene
  BVL33_RS02835 (BVL33_02835) aroK 586075..586635 (+) 561 WP_004909618.1 shikimate kinase AroK -

Sequence


Protein


Download         Length: 214 a.a.        Molecular weight: 23774.17 Da        Isoelectric Point: 5.1372

>NTDB_id=212800 BVL33_RS02815 WP_004909633.1 581950..582594(+) (pilN) [Acinetobacter junii strain 65]
MAKINLLPWRDELREQRKKQFIAYCVGVAALGVASVLAGWGYLDYKLNDQEQANQLIVSTNQNLDAQLKSLDGLQERRNA
IIERMKLIQGLQGQRPVAVRLIDELVRVTPPTMYLTKFTRTGDKFTIEGKAESPNTVAELLRNLEASPWYRNAFMNSFLA
AEEKKDKTVSSLIPRIEENYGSFVVTVDLGEIGTTVEADPLAETVASGTVGAAQ

Nucleotide


Download         Length: 645 bp        

>NTDB_id=212800 BVL33_RS02815 WP_004909633.1 581950..582594(+) (pilN) [Acinetobacter junii strain 65]
ATGGCAAAGATTAACTTACTCCCTTGGCGTGATGAGCTAAGAGAACAACGAAAGAAACAATTTATTGCATATTGTGTAGG
GGTTGCTGCATTAGGTGTGGCATCGGTTTTGGCAGGATGGGGTTATCTTGATTACAAATTAAATGATCAAGAACAAGCGA
ACCAACTGATTGTGAGCACAAATCAAAATCTTGATGCTCAATTAAAATCCTTAGATGGCTTGCAAGAGCGACGTAATGCA
ATTATTGAACGGATGAAACTCATTCAAGGTTTGCAAGGTCAAAGACCTGTCGCTGTACGTTTAATCGATGAATTGGTGCG
AGTTACTCCGCCTACCATGTATTTGACTAAATTTACACGTACAGGCGATAAGTTCACGATTGAAGGTAAAGCTGAAAGTC
CAAACACAGTAGCTGAATTACTGAGAAATCTTGAAGCATCACCTTGGTATCGCAACGCTTTTATGAATTCCTTTTTAGCG
GCTGAAGAGAAAAAAGACAAAACCGTCAGCTCGCTTATACCTCGTATTGAAGAAAACTATGGAAGTTTTGTTGTAACTGT
TGATCTTGGTGAAATAGGTACAACAGTTGAAGCTGACCCATTAGCAGAAACGGTCGCATCAGGAACAGTGGGGGCAGCAC
AATGA

Domains


Predicted by InterproScan.

(100-169)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB S7WRY4

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilN Acinetobacter baumannii D1279779

76.636

100

0.766

  comN Acinetobacter baylyi ADP1

73.333

98.131

0.72


Multiple sequence alignment