Detailed information
Bioinformatically predicted
Overview
| Name | pilP | Type | Machinery gene |
| Locus tag | AT570_RS04955 | Genome accession | NZ_CP019034 |
| Coordinates | 1062825..1063352 (-) | Length | 175 a.a. |
| NCBI ID | WP_000695065.1 | Uniprot ID | N9K1N5 |
| Organism | Acinetobacter baumannii strain AB042 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1057825..1068352
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AT570_RS04935 (AT570_04935) | - | 1058009..1058884 (-) | 876 | WP_000218805.1 | hypothetical protein | - |
| AT570_RS04940 (AT570_04940) | aroB | 1058900..1059982 (-) | 1083 | WP_001193998.1 | 3-dehydroquinate synthase | - |
| AT570_RS04945 (AT570_04945) | aroK | 1060011..1060580 (-) | 570 | WP_000643712.1 | shikimate kinase AroK | - |
| AT570_RS04950 (AT570_04950) | pilQ | 1060592..1062757 (-) | 2166 | WP_001017031.1 | type IV pilus secretin PilQ | Machinery gene |
| AT570_RS04955 (AT570_04955) | pilP | 1062825..1063352 (-) | 528 | WP_000695065.1 | pilus assembly protein PilP | Machinery gene |
| AT570_RS04960 (AT570_04960) | pilO | 1063363..1064103 (-) | 741 | WP_000076102.1 | type 4a pilus biogenesis protein PilO | Machinery gene |
| AT570_RS04965 (AT570_04965) | pilN | 1064100..1064741 (-) | 642 | WP_000201223.1 | PilN domain-containing protein | Machinery gene |
| AT570_RS04970 (AT570_04970) | pilM | 1064741..1065799 (-) | 1059 | WP_002014066.1 | pilus assembly protein PilM | Machinery gene |
Sequence
Protein
Download Length: 175 a.a. Molecular weight: 19419.64 Da Isoelectric Point: 8.9898
>NTDB_id=212641 AT570_RS04955 WP_000695065.1 1062825..1063352(-) (pilP) [Acinetobacter baumannii strain AB042]
MKIKQITLYVLACAVLVGCDSRIDAVNQEMANIRNQPPLPIEPAPIFTPVPQFNYAAHQLKSPFMPSSLAAELKIMAGKR
VYPNFSRAPQPLESYALEALNMKGSMRNNRGQILALIQTPDQQIERVQVGNYMGMNQGRITHISPTQIDLVEIVPDGREG
YVERPRTLVLIGPAP
MKIKQITLYVLACAVLVGCDSRIDAVNQEMANIRNQPPLPIEPAPIFTPVPQFNYAAHQLKSPFMPSSLAAELKIMAGKR
VYPNFSRAPQPLESYALEALNMKGSMRNNRGQILALIQTPDQQIERVQVGNYMGMNQGRITHISPTQIDLVEIVPDGREG
YVERPRTLVLIGPAP
Nucleotide
Download Length: 528 bp
>NTDB_id=212641 AT570_RS04955 WP_000695065.1 1062825..1063352(-) (pilP) [Acinetobacter baumannii strain AB042]
ATGAAAATTAAGCAAATTACTCTTTATGTTTTGGCGTGTGCTGTGCTTGTCGGTTGTGATTCAAGAATTGATGCAGTAAA
TCAGGAAATGGCCAATATTCGTAATCAGCCGCCACTCCCTATTGAACCAGCACCGATTTTTACTCCTGTACCACAATTTA
ATTACGCTGCTCATCAATTAAAAAGCCCATTTATGCCAAGTTCTCTAGCTGCCGAGCTCAAGATTATGGCTGGGAAACGG
GTTTATCCGAATTTCTCACGTGCGCCCCAACCACTCGAAAGTTATGCACTTGAAGCTTTAAATATGAAAGGGAGCATGCG
TAATAATCGAGGGCAGATATTGGCCTTGATCCAGACACCGGATCAGCAGATTGAACGGGTACAAGTGGGTAACTATATGG
GTATGAATCAGGGCCGTATTACCCATATTAGTCCAACCCAGATTGATCTGGTTGAAATCGTACCAGATGGTCGAGAAGGC
TATGTCGAAAGACCAAGAACATTGGTCTTGATTGGGCCTGCACCCTAA
ATGAAAATTAAGCAAATTACTCTTTATGTTTTGGCGTGTGCTGTGCTTGTCGGTTGTGATTCAAGAATTGATGCAGTAAA
TCAGGAAATGGCCAATATTCGTAATCAGCCGCCACTCCCTATTGAACCAGCACCGATTTTTACTCCTGTACCACAATTTA
ATTACGCTGCTCATCAATTAAAAAGCCCATTTATGCCAAGTTCTCTAGCTGCCGAGCTCAAGATTATGGCTGGGAAACGG
GTTTATCCGAATTTCTCACGTGCGCCCCAACCACTCGAAAGTTATGCACTTGAAGCTTTAAATATGAAAGGGAGCATGCG
TAATAATCGAGGGCAGATATTGGCCTTGATCCAGACACCGGATCAGCAGATTGAACGGGTACAAGTGGGTAACTATATGG
GTATGAATCAGGGCCGTATTACCCATATTAGTCCAACCCAGATTGATCTGGTTGAAATCGTACCAGATGGTCGAGAAGGC
TATGTCGAAAGACCAAGAACATTGGTCTTGATTGGGCCTGCACCCTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilP | Acinetobacter baumannii D1279779 |
100 |
100 |
1 |
| comL | Acinetobacter baylyi ADP1 |
71.839 |
99.429 |
0.714 |