Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   PA0408 Genome accession   NC_002516
Coordinates   449639..450046 (+) Length   135 a.a.
NCBI ID   NP_249099.1    Uniprot ID   P46384
Organism   Pseudomonas aeruginosa PAO1     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 444639..455046
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  PA0402 pyrB 444687..445691 (-) 1005 NP_249093.1 aspartate carbamoyltransferase -
  PA0403 pyrR 445715..446227 (-) 513 NP_249094.1 bifunctional pyrimidine regulatory protein PyrR/uracil phosphoribosyltransferase -
  PA0404 - 446339..446773 (-) 435 NP_249095.1 Holliday junction resolvase -
  PA0405 - 446773..447342 (-) 570 NP_249096.1 hypothetical protein -
  PA0406 tonB3 447391..448350 (-) 960 NP_249097.1 transporter TonB -
  PA0407 gshB 448431..449384 (-) 954 NP_249098.1 glutathione synthetase -
  PA0408 pilG 449639..450046 (+) 408 NP_249099.1 pilus biosynthesis/twitching motility protein PilG Regulator
  PA0409 pilH 450093..450458 (+) 366 NP_249100.1 twitching motility protein PilH Machinery gene
  PA0410 pilI 450509..451045 (+) 537 NP_249101.1 twitching motility protein PilI -
  PA0411 pilJ 451130..453178 (+) 2049 NP_249102.1 twitching motility protein PilJ -
  PA0412 pilK 453239..454114 (+) 876 NP_249103.1 methyltransferase PilK -

Sequence

Protein


Download         Length: 135 a.a.        Molecular weight: 14718.11 Da        Isoelectric Point: 7.1340

>NTDB_id=21241 PA0408 NP_249099.1 449639..450046(+) (pilG) [Pseudomonas aeruginosa PAO1]
MEQQSDGLKVMVIDDSKTIRRTAETLLKKVGCDVITAIDGFDALAKIADTHPNIIFVDIMMPRLDGYQTCALIKNNSAFK
STPVIMLSSKDGLFDKAKGRIVGSDQYLTKPFSKEELLGAIKAHVPSFTPVDAVS

Nucleotide


Download         Length: 408 bp        

>NTDB_id=21241 PA0408 NP_249099.1 449639..450046(+) (pilG) [Pseudomonas aeruginosa PAO1]
ATGGAACAGCAATCCGACGGTTTGAAAGTGATGGTGATCGACGATTCGAAAACGATTCGTCGCACCGCCGAAACACTGCT
GAAAAAGGTCGGTTGCGACGTGATCACGGCAATCGACGGCTTCGATGCCCTGGCGAAGATCGCCGATACCCATCCGAACA
TCATTTTCGTCGACATCATGATGCCGCGCCTGGATGGCTATCAGACCTGCGCCCTGATCAAGAACAACAGCGCGTTCAAG
TCCACCCCGGTGATCATGCTGTCCTCCAAGGACGGCCTGTTCGACAAGGCCAAGGGGCGCATCGTCGGCTCCGACCAGTA
CCTCACCAAGCCGTTCAGCAAGGAAGAGCTGCTGGGCGCGATCAAGGCACACGTACCCAGCTTCACCCCGGTGGACGCCG
TTTCCTGA

Domains

Predicted by InterProScan.

Response regulator receiver domain (Response_reg)

(10-121)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB P46384

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

74.803

94.074

0.704
  vicR Streptococcus mutans UA159

44.444

86.667

0.385

Multiple sequence alignment