Detailed information NTG0211700

Bioinformatically predicted

Overview

• Name: comGF/cglF
• Type: Machinery gene
• Locus tag: BVD85_RS00680
• Genome accession: NZ_CP018908
• Coordinates: 99793..100227 (+)
• Length: 144 a.a.
• NCBI ID: WP_011922561.1
• Uniprot ID: -
• Organism: Streptococcus suis strain SS2-1
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 94793..105227

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BVD85_RS00645 (BVD85_00645)	-	95542..95907 (+)	366	WP_002936568.1	DUF1033 family protein	-
BVD85_RS00650 (BVD85_00650)	-	95942..96885 (-)	944	Protein_100	S66 family peptidase	-
BVD85_RS00655 (BVD85_00655)	comYA	96971..97921 (+)	951	WP_011921718.1	competence type IV pilus ATPase ComGA	Machinery gene
BVD85_RS00660 (BVD85_00660)	comYB	97833..98870 (+)	1038	WP_011921719.1	competence type IV pilus assembly protein ComGB	Machinery gene
BVD85_RS00665 (BVD85_00665)	comYC	98872..99153 (+)	282	WP_011921720.1	competence type IV pilus major pilin ComGC	Machinery gene
BVD85_RS00670 (BVD85_00670)	comGD	99134..99541 (+)	408	WP_011921721.1	competence type IV pilus minor pilin ComGD	-
BVD85_RS00675 (BVD85_00675)	comYE	99513..99806 (+)	294	WP_011921722.1	competence type IV pilus minor pilin ComGE	Machinery gene
BVD85_RS00680 (BVD85_00680)	comGF/cglF	99793..100227 (+)	435	WP_011922561.1	competence type IV pilus minor pilin ComGF	Machinery gene
BVD85_RS00685 (BVD85_00685)	comGG	100205..100615 (+)	411	WP_011921724.1	competence type IV pilus minor pilin ComGG	-
BVD85_RS00690 (BVD85_00690)	comYH	100672..101625 (+)	954	WP_011922562.1	class I SAM-dependent methyltransferase	Machinery gene
BVD85_RS00695 (BVD85_00695)	-	101675..102862 (+)	1188	WP_011921727.1	acetate kinase	-
BVD85_RS00700 (BVD85_00700)	-	103177..103728 (+)	552	WP_012774908.1	folate family ECF transporter S component	-
BVD85_RS00705 (BVD85_00705)	-	103784..105040 (+)	1257	WP_011921729.1	bifunctional folylpolyglutamate synthase/dihydrofolate synthase	-

Sequence

Protein

• Length: 144 a.a.
• Molecular weight: 16491.85 Da
• Isoelectric Point: 5.9234

>NTDB_id=211700 BVD85_RS00680 WP_011922561.1 99793..100227(+) (comGF/cglF) [Streptococcus suis strain SS2-1]
MLKSKIPAFTLLECLVVLVILSGSLLIFEGLSKLLVQEAHYQGQTVQKEWLVFSSQLRSEWDQAELVKVENGKVYVNKGE
QALAFGKSWSDDFRKTNDRGQGYQPMLYQVDSAAISQENQLVRIDFSFKNGEERTFIYAFKEKS

Nucleotide

• Length: 435 bp

>NTDB_id=211700 BVD85_RS00680 WP_011922561.1 99793..100227(+) (comGF/cglF) [Streptococcus suis strain SS2-1]
TTGTTAAAAAGTAAAATTCCTGCTTTTACACTCTTGGAATGTTTGGTGGTTCTAGTCATTCTGTCAGGTAGCCTCTTGAT
TTTTGAAGGCTTATCCAAATTACTAGTCCAGGAAGCGCATTATCAAGGTCAGACCGTTCAAAAGGAATGGTTGGTCTTCT
CTAGCCAATTGCGGTCGGAGTGGGACCAGGCTGAATTGGTCAAGGTTGAAAATGGCAAGGTCTATGTCAACAAAGGTGAA
CAGGCTTTGGCCTTTGGCAAGTCATGGTCGGATGATTTTCGGAAAACAAATGATAGAGGCCAGGGTTACCAACCCATGCT
CTATCAGGTGGATAGCGCAGCCATTTCCCAAGAAAACCAGCTGGTGCGCATCGACTTTAGCTTTAAAAACGGAGAGGAGC
GAACCTTTATCTATGCTTTTAAAGAAAAAAGTTAA

Domains

Predicted by InterproScan.

• Putative Competence protein ComGF (ComGF) (37-134)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGF/cglF	Streptococcus pneumoniae TIGR4	52.482	97.917	0.514
comGF/cglF	Streptococcus pneumoniae Rx1	52.482	97.917	0.514
comGF/cglF	Streptococcus pneumoniae D39	52.482	97.917	0.514
comGF/cglF	Streptococcus pneumoniae R6	52.482	97.917	0.514
comGF/cglF	Streptococcus mitis NCTC 12261	52.985	93.056	0.493
comYF	Streptococcus mutans UA140	48.611	100	0.486
comYF	Streptococcus mutans UA159	47.917	100	0.479
comGF/cglF	Streptococcus mitis SK321	50	93.056	0.465
comGF	Lactococcus lactis subsp. cremoris KW2	45.39	97.917	0.444