Detailed information NTG0211551

Bioinformatically predicted

Overview

• Name: degS
• Type: Regulator
• Locus tag: BUN12_RS13435
• Genome accession: NZ_CP018902
• Coordinates: 2570465..2571628 (-)
• Length: 387 a.a.
• NCBI ID: WP_013353787.1
• Uniprot ID: A0A9P1JKJ4
• Organism: Bacillus amyloliquefaciens strain HK1
• Function: phosphorylation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 2565465..2576628

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BUN12_RS13405 (BUN12_2630)	-	2565731..2566150 (-)	420	WP_013353782.1	TIGR03826 family flagellar region protein	-
BUN12_RS21725	comFC	2566224..2566913 (-)	690	WP_198315882.1	ComF family protein	Machinery gene
BUN12_RS13415 (BUN12_2632)	-	2566919..2567203 (-)	285	WP_013353784.1	late competence development ComFB family protein	-
BUN12_RS13420 (BUN12_2633)	comFA	2567262..2568647 (-)	1386	WP_013353785.1	DEAD/DEAH box helicase	Machinery gene
BUN12_RS13425 (BUN12_2634)	-	2568754..2569602 (-)	849	WP_013353786.1	DegV family protein	-
BUN12_RS13430 (BUN12_2635)	degU	2569699..2570388 (-)	690	WP_003219701.1	two-component system response regulator DegU	Regulator
BUN12_RS13435 (BUN12_2636)	degS	2570465..2571628 (-)	1164	WP_013353787.1	two-component sensor histidine kinase DegS	Regulator
BUN12_RS13440 (BUN12_2637)	-	2571851..2572498 (+)	648	WP_013353788.1	YigZ family protein	-
BUN12_RS13445 (BUN12_2638)	-	2572503..2573777 (+)	1275	WP_013353789.1	LCP family protein	-
BUN12_RS13450 (BUN12_2639)	-	2573877..2574953 (-)	1077	WP_013353790.1	glycosyltransferase family 4 protein	-
BUN12_RS13455 (BUN12_2640)	tuaH	2575086..2576282 (-)	1197	WP_013353791.1	teichuronic acid biosynthesis protein TuaH	-

Sequence

Protein

• Length: 387 a.a.
• Molecular weight: 45028.85 Da
• Isoelectric Point: 7.1379

>NTDB_id=211551 BUN12_RS13435 WP_013353787.1 2570465..2571628(-) (degS) [Bacillus amyloliquefaciens strain HK1]
MNKSKMDSKVLDSILMKMLKTVDGSKDEVFQIGEQSRQQYEQLVEELKQIKQQVYEVIELGDKLEVHTRHARNRLSEVSR
NFHKFSEEEIRNAYEKAHKLQVELTMIQQREKQLRERRDDLERRLLGLQEIIERSESLVSQITVVLNYLNQDLRQVGLLL
ADAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDRGTEDGFQEIRNLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLYTTEEYNGKVKIHFQCIGDTENKRLAPQFEVALFRLAQEAVTNALKHSESEEITVKVEV
TADFVVLIIKDNGKGFDIKEAKQKKNKSFGLLGMKERVDLLEGTITIDSKLGLGTFIMIKVPLSLGL

Nucleotide

• Length: 1164 bp

>NTDB_id=211551 BUN12_RS13435 WP_013353787.1 2570465..2571628(-) (degS) [Bacillus amyloliquefaciens strain HK1]
ATGAATAAATCGAAGATGGACTCCAAAGTTTTGGATTCTATACTTATGAAAATGCTGAAAACCGTGGACGGGAGTAAGGA
CGAGGTTTTTCAAATCGGAGAGCAGTCGCGCCAGCAATATGAGCAGCTGGTCGAAGAACTCAAACAGATCAAACAGCAGG
TGTACGAAGTCATTGAGCTGGGCGACAAACTCGAAGTACATACCCGGCATGCAAGAAACCGCTTGTCGGAAGTAAGCAGA
AATTTCCATAAGTTCAGCGAAGAAGAAATTCGCAACGCCTATGAAAAGGCGCACAAACTTCAAGTGGAACTGACGATGAT
CCAGCAGCGTGAAAAGCAGCTGCGGGAGCGCAGAGATGATTTAGAACGCCGGCTTTTGGGGCTTCAGGAAATCATTGAAC
GGTCAGAATCATTGGTCAGCCAAATAACCGTCGTTCTGAATTACCTGAATCAAGACCTTCGCCAAGTAGGGCTTCTGCTT
GCCGATGCGCAGGCTAAACAAGATTTCGGTTTAAGAATTATCGAAGCCCAGGAGGAAGAAAGAAAAAGAGTTTCCAGAGA
AATTCATGACGGTCCGGCTCAAATGCTGGCAAATGTTATGATGAGATCGGAATTGATAGAACGGATCTTCCGCGACCGCG
GCACGGAGGACGGCTTTCAGGAAATCAGAAATCTTCGCCAGAATGTGCGGAATGCTCTTTACGAAGTCAGAAGGATTATA
TATGATTTAAGACCGATGGCATTGGACGATCTCGGGCTGATTCCGACACTGAGAAAATATCTTTATACAACTGAAGAATA
CAACGGAAAGGTGAAAATACATTTTCAGTGCATCGGAGACACGGAGAACAAAAGGCTTGCCCCGCAATTTGAAGTGGCGC
TTTTCCGTCTCGCTCAGGAAGCCGTCACAAATGCGCTGAAGCATTCAGAATCAGAGGAAATTACAGTAAAAGTGGAAGTA
ACTGCTGATTTTGTGGTTCTTATTATTAAGGACAACGGAAAAGGCTTTGATATCAAGGAAGCTAAACAAAAGAAAAACAA
GTCATTCGGCTTGCTGGGAATGAAAGAAAGAGTAGATCTGCTCGAAGGAACGATAACGATAGACTCTAAACTAGGTCTTG
GGACATTTATCATGATTAAGGTTCCTTTATCTCTCGGCCTATAA

Domains

Predicted by InterproScan.

• Sensor protein DegS (DegS) (12-170)

• Histidine kinase (HisKA_3) (180-248)

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (291-384)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
degS	Bacillus subtilis subsp. subtilis str. 168	95.325	99.483	0.948