Detailed information    

insolico Bioinformatically predicted

Overview


Name   dprA   Type   Machinery gene
Locus tag   MOTT16_RS00090 Genome accession   NZ_CP024185
Coordinates   21299..22528 (+) Length   409 a.a.
NCBI ID   WP_099833307.1    Uniprot ID   -
Organism   Moraxella osloensis strain TT16     
Function   ssDNA binding; loading RecA onto ssDNA (predicted from homology)   
DNA processing

Genomic Context


Location: 16299..27528
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MOTT16_RS12735 - 16897..17160 (-) 264 WP_264754950.1 glutaredoxin domain-containing protein -
  MOTT16_RS12740 - 17167..17559 (-) 393 Protein_14 peroxiredoxin -
  MOTT16_RS00070 (MOTT16_00070) - 17923..18411 (+) 489 WP_050326051.1 YajQ family cyclic di-GMP-binding protein -
  MOTT16_RS00075 (MOTT16_00075) hisB 18489..19091 (-) 603 WP_007117432.1 imidazoleglycerol-phosphate dehydratase HisB -
  MOTT16_RS00080 (MOTT16_00080) def 19114..19644 (-) 531 WP_099833305.1 peptide deformylase -
  MOTT16_RS00085 (MOTT16_00085) tsaP 20026..21129 (+) 1104 WP_099833306.1 LysM peptidoglycan-binding domain-containing protein Machinery gene
  MOTT16_RS00090 (MOTT16_00090) dprA 21299..22528 (+) 1230 WP_099833307.1 DNA-processing protein DprA Machinery gene
  MOTT16_RS00095 (MOTT16_00095) - 22578..23183 (+) 606 WP_099833308.1 L-threonylcarbamoyladenylate synthase -
  MOTT16_RS00100 (MOTT16_00100) grpE 23407..23988 (+) 582 WP_065253958.1 nucleotide exchange factor GrpE -
  MOTT16_RS00105 (MOTT16_00105) dnaK 24150..26072 (+) 1923 WP_060994956.1 molecular chaperone DnaK -

Sequence


Protein


Download         Length: 409 a.a.        Molecular weight: 44662.13 Da        Isoelectric Point: 6.6839

>NTDB_id=211457 MOTT16_RS00090 WP_099833307.1 21299..22528(+) (dprA) [Moraxella osloensis strain TT16]
MQDYQPNLNPAQQAALLLWHLVNLSVPVYNKLVARFGSAEQAIQAKLADWQALGLHDNHHKRFAEFISASRTSQFLHDTL
LELSQGQYGVVFDNDPLYPNQLKNIYDPPPLLLYQGNLSALSQPQLAIVGSRKPSPHAEKIAFDMAQYLAHEGLWVTSGM
AEGIDKQAHLGALSLQMTATQGGTIAVLGNGIKHCYPKNHASLKAHIIASGGCVISELLPDMPSNRYHFPRRNRLVAGLS
LATLVVEAAAKSGSLITAREANEQGKQVFAIPSHIDNLNAKGCHQLIREGATLVDHPSQILEDLSIFKSPIVKATEVETA
PIVAQAVSNSPQLPSESAPKTQPHQATLAMDVPPHLQTLLNQLDWVGQDLDSLVDTTHTDIATLMGWLIELELMGLVMQR
GGLYMRCRP

Nucleotide


Download         Length: 1230 bp        

>NTDB_id=211457 MOTT16_RS00090 WP_099833307.1 21299..22528(+) (dprA) [Moraxella osloensis strain TT16]
ATGCAGGATTATCAGCCTAACCTAAACCCGGCGCAGCAGGCTGCCTTATTATTATGGCATTTAGTGAACTTATCGGTGCC
TGTTTATAACAAGCTTGTAGCGCGTTTTGGTAGCGCTGAACAAGCGATTCAAGCTAAGCTGGCAGACTGGCAAGCGCTGG
GCTTGCATGATAATCACCACAAACGCTTTGCTGAGTTTATCAGCGCCAGTCGAACCAGCCAATTTTTGCATGATACGCTA
TTAGAACTATCACAAGGGCAGTATGGTGTGGTGTTTGATAATGACCCTTTATATCCGAATCAGTTAAAAAACATCTATGA
CCCACCCCCTTTGCTATTGTACCAAGGCAACTTATCTGCCTTAAGCCAACCACAATTGGCGATCGTTGGAAGTCGTAAAC
CTAGCCCACATGCCGAAAAAATTGCCTTTGATATGGCGCAATATTTGGCGCACGAAGGCTTATGGGTCACCAGTGGCATG
GCAGAAGGAATTGACAAACAAGCACATTTAGGTGCGTTAAGTTTACAGATGACGGCCACACAAGGTGGTACTATTGCGGT
ACTGGGCAATGGTATTAAACACTGTTACCCAAAAAATCACGCCAGCCTTAAAGCCCATATTATTGCGTCAGGTGGCTGCG
TCATTAGTGAATTATTGCCTGATATGCCGAGCAATCGCTACCATTTTCCAAGGCGCAATCGTCTCGTCGCTGGGCTAAGT
TTAGCAACTTTGGTTGTAGAAGCGGCTGCAAAAAGTGGCTCGCTCATCACGGCCAGAGAAGCCAACGAGCAAGGCAAACA
AGTTTTTGCTATTCCTAGTCATATTGATAACCTCAACGCCAAAGGTTGCCACCAATTGATTCGTGAGGGTGCGACCTTGG
TCGATCATCCATCACAAATTTTGGAAGATTTATCAATTTTTAAATCACCGATTGTCAAAGCCACCGAGGTTGAAACAGCG
CCGATAGTTGCACAGGCAGTGAGCAATAGCCCTCAATTACCGTCCGAATCAGCACCAAAAACCCAGCCGCACCAAGCGAC
ATTGGCGATGGATGTGCCCCCGCATTTGCAGACACTACTTAATCAACTCGATTGGGTAGGGCAAGATTTAGACAGCTTGG
TCGATACGACCCACACCGATATTGCGACCCTCATGGGCTGGCTGATTGAGCTTGAACTCATGGGACTGGTGATGCAGCGC
GGCGGTCTATACATGCGCTGCCGACCTTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dprA Acinetobacter baumannii strain A118

44.03

98.289

0.433

  dprA Acinetobacter baumannii D1279779

44.051

96.577

0.425

  dprA Acinetobacter baylyi ADP1

43.878

95.844

0.421